Pairwise Alignments

Query, 596 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 543 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  232 bits (592), Expect = 3e-65
 Identities = 130/351 (37%), Positives = 210/351 (59%), Gaps = 2/351 (0%)

Query: 239 EINQFIWMVSLLGAFALIVTTSLALLIAKRVNNAVHHLASSATHIAAG--DLTQRIPVTG 296
           E    +W   +  A  +++   L + I + +   +     +   IA+G  DLT+ +   G
Sbjct: 184 EFKTQLWNAGMFIAGIVLIMVLLLVTIVRSIVRPLRAAVGAMASIASGESDLTRTLETHG 243

Query: 297 NDEFSDIAKYVNRIVTSFQEVISSNRHSVSALATAAEENAAVAMQTKQNIVEQQSQTQQI 356
           NDE +++  + N  V   + V+   +HS  AL  A+ +  + A Q +    +Q  Q   +
Sbjct: 244 NDEITELGTHFNAFVAKLRNVVGQLQHSAVALGQASTDLGSDAEQAQSRSEQQSQQMDLV 303

Query: 357 AAAIHQFTATVHEVAQSAGLAAEASEEAEQAAMQGRKVVEENIAMIEGLSNDLQKMLAAM 416
           A A+++ T  V +VA++A  AA    +AE  A QG+  ++ ++  IE LS+ + + +  M
Sbjct: 304 ATAVNEVTYGVQDVAKNAEHAASEMRDAESQAQQGQINIDNSLRQIEHLSSTIGQAVQVM 363

Query: 417 QLLAKDSEDIGSVVDVIQSISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLASRTQ 476
           Q LA +S  IGSV++VI SI+EQTNLLALNAAIEAARAGEQGRGFAVVADEVR LA RTQ
Sbjct: 364 QSLASESTQIGSVLEVISSIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRLLAQRTQ 423

Query: 477 ESTKQILQTVQRLQQSSRDSANLIEQGVSGASKAVEKARLAGTALSQITANVDRISTMNT 536
           +ST +I   ++RLQ+ S  +  +I      +   +E+A  AG +L+ I+  +  ++++N 
Sbjct: 424 KSTAEIQSMIERLQKHSDAAVKVIGDSSRSSQLTIEQANQAGQSLTSISQALRNLNSLNA 483

Query: 537 QIATASEEQSAVTEEINKNIITISEISNQTALGAQQSSEATLELARLAESM 587
            IA+A+ +Q+ V ++IN+N+   +++S  TAL A+QS+ A+L L  L+E +
Sbjct: 484 SIASATLQQTHVVDDINQNVTQAAQLSQSTALAAEQSTSASLHLRGLSEEL 534