Pairwise Alignments

Query, 596 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 626 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  240 bits (613), Expect = 1e-67
 Identities = 138/371 (37%), Positives = 222/371 (59%), Gaps = 7/371 (1%)

Query: 224 IQTQEGKNNFSASQHEINQFIWMVSLLGAFALIVTTSLALLIAKRVNNAVHHLASSATHI 283
           IQ +   ++   +Q +I  ++ + +LLG  A       A LI + + + +         +
Sbjct: 261 IQNEFRASDAEKAQEKILLWLGLSALLGVLA-------AWLITRSIVHPLKETVEIVEVV 313

Query: 284 AAGDLTQRIPVTGNDEFSDIAKYVNRIVTSFQEVISSNRHSVSALATAAEENAAVAMQTK 343
           A GD T +  VT NDE   +   + R+ +  + +I   +  +  +A+AAE+ +AV  QT 
Sbjct: 314 AEGDFTYKTQVTRNDELGALQGSMLRMTSGLRSLIGEMKDGIVQVASAAEQLSAVTEQTS 373

Query: 344 QNIVEQQSQTQQIAAAIHQFTATVHEVAQSAGLAAEASEEAEQAAMQGRKVVEENIAMIE 403
             +  Q+ +T+QIA A+ Q TAT HEV+++A  A   ++ A Q A +G +VV+   + IE
Sbjct: 374 AGVNAQKLETEQIATAMQQMTATTHEVSRNAAQAVNTAQIASQLAQKGGQVVDRTRSQIE 433

Query: 404 GLSNDLQKMLAAMQLLAKDSEDIGSVVDVIQSISEQTNLLALNAAIEAARAGEQGRGFAV 463
            L+ ++     AM  L  +++ IG V+DVI+++++QTNLLALNAAIEAARAGE GRGFAV
Sbjct: 434 TLAREMNMTRTAMAALRGNTQSIGGVLDVIKTVADQTNLLALNAAIEAARAGEAGRGFAV 493

Query: 464 VADEVRTLASRTQESTKQILQTVQRLQQSSRDSANLIEQGVSGASKAVEKARLAGTALSQ 523
           VADEVR LA RT+ ST +I   +  LQ S+     ++EQ ++    +VE +  A   L  
Sbjct: 494 VADEVRGLAVRTRTSTDEIALLINELQTSTDHMGQVLEQNLALTDSSVELSTQASEVLQS 553

Query: 524 ITANVDRISTMNTQIATASEEQSAVTEEINKNIITISEISNQTALGAQQSSEATLELARL 583
           ITA+V  I  MN QIA A+E+QS V EEI + +  + +IS+QTA  +++++ +++ELAR+
Sbjct: 554 ITASVHEIEVMNEQIAVATEQQSNVGEEIGRGVTNVRDISDQTAAASEETATSSVELARV 613

Query: 584 AESMQQEVARY 594
           +  +Q+   R+
Sbjct: 614 SARLQEMTNRF 624