Pairwise Alignments

Query, 596 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 638 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  274 bits (700), Expect = 9e-78
 Identities = 155/395 (39%), Positives = 244/395 (61%), Gaps = 11/395 (2%)

Query: 211 YNEIKKAAEAFLDIQTQEGKNNFSASQHEINQ-----------FIWMVSLLGAFALIVTT 259
           Y + + A++A LD  T  G +  + S   I +            + M+    A A+++  
Sbjct: 242 YRDAQAASKAALDKMTTLGVSMLATSNDLITRQNKSRDADSAKSVQMIIAATALAMVLGI 301

Query: 260 SLALLIAKRVNNAVHHLASSATHIAAGDLTQRIPVTGNDEFSDIAKYVNRIVTSFQEVIS 319
             A +I +++   +         +A+GDL++ + V   DE   +   + R+  S +E++ 
Sbjct: 302 LAAWVITRQITTPLQETLEVVERVASGDLSRNLNVDRKDELGKLQATIQRMTVSLRELVG 361

Query: 320 SNRHSVSALATAAEENAAVAMQTKQNIVEQQSQTQQIAAAIHQFTATVHEVAQSAGLAAE 379
             R  V+ +A+AAEE +AV  QT   +  Q+ +T Q+A A+H+ TATV EVA++A  A+E
Sbjct: 362 GIRDGVTQIASAAEELSAVTEQTSAGVNSQKVETDQVATAMHEMTATVQEVARNAEEASE 421

Query: 380 ASEEAEQAAMQGRKVVEENIAMIEGLSNDLQKMLAAMQLLAKDSEDIGSVVDVIQSISEQ 439
           A+  A++ A  G +VV E IA IE L++ +     AM  L ++S+ IGSV+DVI+S++EQ
Sbjct: 422 AAVAADRQARDGERVVNEAIAQIERLASAVGNSSEAMGALKQESDKIGSVLDVIKSVAEQ 481

Query: 440 TNLLALNAAIEAARAGEQGRGFAVVADEVRTLASRTQESTKQILQTVQRLQQSSRDSANL 499
           TNLLALNAAIEAARAGE GRGFAVVADEVR+LA RTQ+ST++I   + RLQ  ++ +  +
Sbjct: 482 TNLLALNAAIEAARAGEAGRGFAVVADEVRSLAQRTQKSTEEIEALIARLQSGTQQATTV 541

Query: 500 IEQGVSGASKAVEKARLAGTALSQITANVDRISTMNTQIATASEEQSAVTEEINKNIITI 559
           ++     ++ +VE  R AG +L+ IT  V  I  MN QIA A+EEQSA  EEIN++II +
Sbjct: 542 MDSSRELSTSSVELTRRAGGSLANITKTVSSIQAMNQQIAAAAEEQSATAEEINRSIINV 601

Query: 560 SEISNQTALGAQQSSEATLELARLAESMQQEVARY 594
            ++S QT+  +++++ +++ELARL   +Q  V+R+
Sbjct: 602 RDVSEQTSAASEETAASSVELARLGNHLQVLVSRF 636