Pairwise Alignments

Query, 596 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 647 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  268 bits (686), Expect = 4e-76
 Identities = 166/447 (37%), Positives = 252/447 (56%), Gaps = 11/447 (2%)

Query: 159 TVLDVQEKAVIQTLKEKLDQVTR----------QGFEPALQQLKAEKYDAANLILLQVIN 208
           T  D  E A I  + E L ++ +          QG  PA   L++ +        +Q   
Sbjct: 198 TTRDADESAAIAAIDEALKEIGQIAQDQGNESLQGLTPATAALQSYRERLGEFKQIQTKA 257

Query: 209 PLYNEIKKA-AEAFLDIQTQEGKNNFSASQHEINQFIWMVSLLGAFALIVTTSLALLIAK 267
               EI +   E  LD          +    E      M+S +   AL++    A ++ +
Sbjct: 258 EADQEIMEGLGETLLDSVGALNHLQTAQRDSEAANSSAMLSSVAGLALLIGLLAAWIMTR 317

Query: 268 RVNNAVHHLASSATHIAAGDLTQRIPVTGNDEFSDIAKYVNRIVTSFQEVISSNRHSVSA 327
           ++   +    S+A  IA GDL++ I VT  DE   +   +  +  S +E++      VS 
Sbjct: 318 QITVPLQQTLSAAARIAQGDLSRDISVTRRDEMGQLQGSMQTMTVSLRELVGGISEGVSQ 377

Query: 328 LATAAEENAAVAMQTKQNIVEQQSQTQQIAAAIHQFTATVHEVAQSAGLAAEASEEAEQA 387
           +A+AAE+ +AV  QT   +  Q+ +T Q+A A+++  ATV EVA++A  A++A+ +A+Q 
Sbjct: 378 IASAAEQLSAVTKQTCIGVTSQKDETDQVATAMNEMAATVQEVARNAQEASQAAAQADQQ 437

Query: 388 AMQGRKVVEENIAMIEGLSNDLQKMLAAMQLLAKDSEDIGSVVDVIQSISEQTNLLALNA 447
           A  G +VV + I  IE L+ ++     +M  L ++S  I  V+DVI+S+S+QTNLLALNA
Sbjct: 438 ARSGDEVVGQAITQIEQLAREVLNSTQSMSALKQESNKIVGVLDVIKSVSQQTNLLALNA 497

Query: 448 AIEAARAGEQGRGFAVVADEVRTLASRTQESTKQILQTVQRLQQSSRDSANLIEQGVSGA 507
           AIEAARAGE GRGFAVVADEVR LA RTQ+ST++I + +  LQ  ++  A  ++   +  
Sbjct: 498 AIEAARAGEAGRGFAVVADEVRGLAQRTQKSTEEIEELIAALQTGTQQVATTLDSSRTLT 557

Query: 508 SKAVEKARLAGTALSQITANVDRISTMNTQIATASEEQSAVTEEINKNIITISEISNQTA 567
              VE +R AG AL QIT  V  I  MN QIATASEEQS V E+IN+N+I++ +IS QTA
Sbjct: 558 DNTVELSRRAGGALEQITRTVATIQHMNEQIATASEEQSVVAEQINRNVISVRDISEQTA 617

Query: 568 LGAQQSSEATLELARLAESMQQEVARY 594
             ++Q++ +++ELARL   +Q  V ++
Sbjct: 618 AASEQTAASSVELARLGTHLQTLVGKF 644