Pairwise Alignments

Query, 596 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 673 a.a., putative methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella amazonensis SB2B

 Score =  266 bits (680), Expect = 2e-75
 Identities = 166/475 (34%), Positives = 276/475 (58%), Gaps = 14/475 (2%)

Query: 124 SKYALMHDHPITMHVEGIQTSLTNLHR----IVDNEILATVLDVQEKAVIQTLKEKLDQV 179
           SKY L+      M  E ++T +  + R    I+D ++++T+ D   K V++ L+ K   V
Sbjct: 207 SKYELISKELDYMLGE-VKTKMEYISRHGEGIIDADLVSTLNDDSTK-VLKMLEGKDTLV 264

Query: 180 TRQGFEPALQQLKAEKYDAANLILLQVINPLYNEIKKAAEAFLDIQTQEGKNNFSASQHE 239
           T +  +    QL +EK        L V   +    K       DI  Q        + ++
Sbjct: 265 TLKSRQIDSTQLTSEKLTLVEKNALTVTEQMKRLAKDIETVTNDISNQ--------ALND 316

Query: 240 INQFIWMVSLLGAFALIVTTSLALLIAKRVNNAVHHLASSATHIAAGDLTQRIPVTGNDE 299
           IN       +L   A++V   ++  + + +  ++  +  +   +A+GDLT ++  TG+DE
Sbjct: 317 INSASLRTLILVVIAIVVAVVISFAVVRPLKRSLDEVNGALNVLASGDLTHKLDDTGHDE 376

Query: 300 FSDIAKYVNRIVTSFQEVISSNRHSVSALATAAEENAAVAMQTKQNIVEQQSQTQQIAAA 359
           F+++++  NR+V S + +I+S     + LA AAEE +A+  QT   I EQ+SQ  Q+A A
Sbjct: 377 FAELSRNCNRLVDSLRSLIASILDRSNQLAAAAEETSAITSQTTIGIQEQKSQVDQVATA 436

Query: 360 IHQFTATVHEVAQSAGLAAEASEEAEQAAMQGRKVVEENIAMIEGLSNDLQKMLAAMQLL 419
             + +++ H+V  SA  A    ++A++     R + +EN   I  L++++ K    +  +
Sbjct: 437 TTELSSSAHQVNMSADDALSQIKQADEETQHMRTIADENKRTILSLADEVAKASKVINKV 496

Query: 420 AKDSEDIGSVVDVIQSISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLASRTQEST 479
             DS  IGS++DVI+ I+EQTNLLALNAAIEAARAGEQGRGFAVVADEVR+LASRTQ+ST
Sbjct: 497 HSDSASIGSILDVIRGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLASRTQDST 556

Query: 480 KQILQTVQRLQQSSRDSANLIEQGVSGASKAVEKARLAGTALSQITANVDRISTMNTQIA 539
           ++I Q ++ LQQ ++ +  +++ G + A   VEK   A  AL  I+ +V +     T IA
Sbjct: 557 REIQQMIEVLQQGTQQAVAVMQLGQNQAQSCVEKTEQANQALQTISHSVHKAYDAGTHIA 616

Query: 540 TASEEQSAVTEEINKNIITISEISNQTALGAQQSSEATLELARLAESMQQEVARY 594
            A++EQ+ V++++++ +  I+ IS +TALGA+Q+++++ E+ARLAE +Q  V  +
Sbjct: 617 QAAQEQNLVSQQVSEKLEHIAAISEETALGAEQTAKSSHEVARLAEELQSSVKEF 671