Pairwise Alignments

Query, 596 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 621 a.a., putative methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella amazonensis SB2B

 Score =  243 bits (621), Expect = 1e-68
 Identities = 140/383 (36%), Positives = 227/383 (59%), Gaps = 5/383 (1%)

Query: 217 AAEAFLDIQTQEGKNNFSASQHEINQ----FIWMVSLLGAFALIVTTSLALLIAKRVNNA 272
           A  + +D   Q  +     + HEI+      + M + L A   ++   +  +I + +   
Sbjct: 236 ALRSVIDQSEQATQELRELALHEIHDEEGDSVAMATTLFAVIAVLVAIVTFMIIRAIITP 295

Query: 273 VHHLASSATHIAAG-DLTQRIPVTGNDEFSDIAKYVNRIVTSFQEVISSNRHSVSALATA 331
           ++++    +H+    +LT R    G DE ++I ++ N +V SF+ +I     +V+ +  +
Sbjct: 296 INNINQVISHVGKDKNLTLRCDTQGGDEIAEIGQHFNEMVESFRALIQQVNDAVNVMNES 355

Query: 332 AEENAAVAMQTKQNIVEQQSQTQQIAAAIHQFTATVHEVAQSAGLAAEASEEAEQAAMQG 391
            +E +A A Q    ++ Q ++T  +A AI +  AT+ E+A++  LAAE +      A  G
Sbjct: 356 CQELSANATQASDGVLRQLNETDMVATAITEMGATIDEIAKNTELAAERANHTHTNAQVG 415

Query: 392 RKVVEENIAMIEGLSNDLQKMLAAMQLLAKDSEDIGSVVDVIQSISEQTNLLALNAAIEA 451
           ++ VE+ I  I+ L+  L    + +  L +DS  IGSV+DVI+ I+EQTNLLALNAAIEA
Sbjct: 416 QQSVEQTIEKIQSLAQQLNNSASVVAELERDSGTIGSVLDVIRGIAEQTNLLALNAAIEA 475

Query: 452 ARAGEQGRGFAVVADEVRTLASRTQESTKQILQTVQRLQQSSRDSANLIEQGVSGASKAV 511
           ARAGEQGRGFAVVADEVR+LA RTQEST++I   +Q LQ  +R    L+E       ++ 
Sbjct: 476 ARAGEQGRGFAVVADEVRSLAMRTQESTEEIAGIIQTLQSRTRSIVQLMEASQRQGGESA 535

Query: 512 EKARLAGTALSQITANVDRISTMNTQIATASEEQSAVTEEINKNIITISEISNQTALGAQ 571
           E+A  AGT L+QI  +V  I  M+TQIA A EEQS+V  E+NKN++ I +I+ +++  A 
Sbjct: 536 EQAASAGTMLAQINQDVTNIMDMSTQIAAAIEEQSSVAAEVNKNVVVIRDIAEESSHAAM 595

Query: 572 QSSEATLELARLAESMQQEVARY 594
            +++A+ ++   AE +Q+ V+++
Sbjct: 596 ANAKASDDVRERAEYLQRAVSQF 618