Pairwise Alignments

Query, 596 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 541 a.a., putative methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella amazonensis SB2B

 Score =  274 bits (701), Expect = 6e-78
 Identities = 165/436 (37%), Positives = 257/436 (58%), Gaps = 18/436 (4%)

Query: 173 KEKLDQVTRQGFEPALQQLK-------------AEKYDAANLILLQVINPLYNEIKKAAE 219
           ++KL   T+Q F PA QQ++               ++ A  + L QVI+P+  ++ +   
Sbjct: 108 EQKLASQTQQLFAPANQQIQLLIDKLSGKSGSVTGQFSADIIPLYQVIDPISGKVAELVT 167

Query: 220 AFLDIQTQEGKNNFSASQHEINQFIWMVSLLGAFALIVTTSLALLIAKRVNNAVHHLASS 279
             + I   E +   +     +  FI     L  FA+++T+   + + + V   V  +   
Sbjct: 168 LQIHIADLEREQVETLHSSSLKWFIG----LAVFAVLITSFFGVWVNRGVMTPVTEIRQK 223

Query: 280 ATHIAA-GDLTQRIPVTGNDEFSDIAKYVNRIVTSFQEVISSNRHSVSALATAAEENAAV 338
              I    D+T    V  +DE   IAK +N +V   + ++ +   + S L  +A+E    
Sbjct: 224 LRQIREKSDMTVSFTVFRDDELGHIAKDLNGVVNHLKGILKNIAEAASTLGDSADELNEF 283

Query: 339 AMQTKQNIVEQQSQTQQIAAAIHQFTATVHEVAQSAGLAAEASEEAEQAAMQGRKVVEEN 398
             Q    + +QQS+T+Q A A+++ TA V EVAQS+  AAE++  A+++A +G  +V+++
Sbjct: 284 TRQANDRMFKQQSETEQTATAMNEMTAAVAEVAQSSNSAAESARNADESAARGNSIVQQS 343

Query: 399 IAMIEGLSNDLQKMLAAMQLLAKDSEDIGSVVDVIQSISEQTNLLALNAAIEAARAGEQG 458
           I+ +  L++ +Q   A +  LA +S++IG V+DVI+SI+EQTNLLALNAAIEAARAGEQG
Sbjct: 344 ISSMSVLASQIQGTAAVIGELATESQNIGRVLDVIKSIAEQTNLLALNAAIEAARAGEQG 403

Query: 459 RGFAVVADEVRTLASRTQESTKQILQTVQRLQQSSRDSANLIEQGVSGASKAVEKARLAG 518
           RGFAVVADEVRTLA RT EST++I   ++ LQQ  + + N +EQG++    A E    AG
Sbjct: 404 RGFAVVADEVRTLAQRTSESTREIESMIESLQQGVKSAVNSMEQGIAQVDNANESTNAAG 463

Query: 519 TALSQITANVDRISTMNTQIATASEEQSAVTEEINKNIITISEISNQTALGAQQSSEATL 578
           +AL  I A+VD I+ +NT IATA++EQS V E IN++II IS+I+ ++   A   SEA  
Sbjct: 464 SALQDIVASVDSITQLNTHIATAADEQSCVAESINQSIIAISDIAQESTQAANDLSEAVH 523

Query: 579 ELARLAESMQQEVARY 594
           +LA+LA  M+ +V  +
Sbjct: 524 QLAQLAGHMRTQVGTF 539