Pairwise Alignments

Query, 596 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 541 a.a., methyl-accepting chemotaxis protein from Pseudomonas sp. BP01

 Score =  249 bits (635), Expect = 3e-70
 Identities = 167/542 (30%), Positives = 281/542 (51%), Gaps = 10/542 (1%)

Query: 53  VGLRLKLIVVLIVVSILFLGFKGLTGMQSASDSIESLYTKGMQHTIRAGRILDELGSARS 112
           +G+R   +  L+   +LF+G   L   +    + + +    M   +  G I   LG AR+
Sbjct: 8   IGIRAASVFALLGTLVLFMGLTALYETRQMDKATDEIRVTWMPAVVALGDISSNLGRARA 67

Query: 113 QLLLAFQHDPSSKYALMHDHPITMHVEGIQTSLTNLHRIVDNEILATVLDVQEKAVIQTL 172
             L A   D  ++        + M ++GI   L +  +    +   T++   ++A+    
Sbjct: 68  VTLRAALDDNPAE----RSRNLQM-LDGINAELKDGLK----DYADTIIAADDRALFNAF 118

Query: 173 KEKLDQVTRQGFEPALQQLKAEKYDAANLILLQVINPLYNEIKKAAEAFLDIQTQEGKNN 232
            +   Q  +   E  LQ + A + D A   +   +    + + KA  A +D  ++  ++ 
Sbjct: 119 NDAYQQYLKLQVE-VLQDIAAGRMDEAKQQISGPLTQRADSMMKALTALIDYNSKGAEDA 177

Query: 233 FSASQHEINQFIWMVSLLGAFALIVTTSLALLIAKRVNNAVHHLASSATHIAAGDLTQRI 292
              S    ++    +       ++   ++A ++ + +   +    + A  +A GDLTQ I
Sbjct: 178 SQRSSDVADEAFTAIIFSLLVIMLALAAMATVLTRSIVVPLADAVAVAERVATGDLTQEI 237

Query: 293 PVTGNDEFSDIAKYVNRIVTSFQEVISSNRHSVSALATAAEENAAVAMQTKQNIVEQQSQ 352
            VTG DE + + + ++R+  S ++ I     S   LA+A+EE   V   T + + +Q ++
Sbjct: 238 RVTGRDEPALLLRALSRMQGSLRDTIRKIAASSDQLASASEELHTVTEDTSRGLHQQSAE 297

Query: 353 TQQIAAAIHQFTATVHEVAQSAGLAAEASEEAEQAAMQGRKVVEENIAMIEGLSNDLQKM 412
             Q A A++Q TA V EVA +A   A+AS+ A+Q    GR  V + +A I+ L  D+   
Sbjct: 298 IDQAATAVNQMTAAVEEVASNAVSTADASKGADQTTRDGRDRVNQALASIQHLVADVTGT 357

Query: 413 LAAMQLLAKDSEDIGSVVDVIQSISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLA 472
            A ++ LA ++ +I  V+DVI +I+ QTNLLALNAAIEAARAGE GRGFAVVADEVR LA
Sbjct: 358 SAEIEQLANNANEISRVLDVIGAIAGQTNLLALNAAIEAARAGEAGRGFAVVADEVRALA 417

Query: 473 SRTQESTKQILQTVQRLQQSSRDSANLIEQGVSGASKAVEKARLAGTALSQITANVDRIS 532
            RTQ+ST +I Q +  +Q  +  +   +      A+  +E A+ AG AL  I   +  I+
Sbjct: 418 HRTQQSTAEIEQMIAGIQNGTERAVTAMHSSQGRATGTLEVAQGAGQALEVIAEAIASIN 477

Query: 533 TMNTQIATASEEQSAVTEEINKNIITISEISNQTALGAQQSSEATLELARLAESMQQEVA 592
             N  IA+ASEEQ+ V  E+++N++ I +++ QT+ GA Q+S A  +L+RLA  +   VA
Sbjct: 478 QRNLVIASASEEQAQVAREVDRNLVNIRDLAMQTSAGANQTSAAAQDLSRLAVDLNGMVA 537

Query: 593 RY 594
           ++
Sbjct: 538 QF 539