Pairwise Alignments

Query, 596 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 493 a.a., methyl-accepting chemotaxis protein from Pseudomonas fluorescens SBW25-INTG

 Score =  234 bits (597), Expect = 6e-66
 Identities = 137/358 (38%), Positives = 212/358 (59%), Gaps = 8/358 (2%)

Query: 236 SQHEINQFIWMVSLLGAFALIVTTSLALLIAKRVNNAVHHLASSATHIAAGDLTQRIPVT 295
           + + +   I M+++LGA  L++   L+ L    + + + H+  +      GDL+ R+P+ 
Sbjct: 141 ANYAVAVLILMLAMLGASQLLIRFLLSQL--NTLKDVMLHVEKT------GDLSARVPLA 192

Query: 296 GNDEFSDIAKYVNRIVTSFQEVISSNRHSVSALATAAEENAAVAMQTKQNIVEQQSQTQQ 355
             DE   +A   N +   +Q V+++   +   L   A   A+   + +  ++ QQS+T Q
Sbjct: 193 CKDEVGQMASAFNAMQAGYQRVVNTVARTARQLDEGAARLASSMNEVQHGMLGQQSETDQ 252

Query: 356 IAAAIHQFTATVHEVAQSAGLAAEASEEAEQAAMQGRKVVEENIAMIEGLSNDLQKMLAA 415
            A AI++ TATVH +AQ AG   + S+ A+  A  G++VV      I GLS  +Q+    
Sbjct: 253 AATAINEMTATVHHIAQHAGATRDLSQTADTLAGSGQEVVTRVQRSIAGLSTGVQQTAEM 312

Query: 416 MQLLAKDSEDIGSVVDVIQSISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLASRT 475
           +Q LA+DS+ I  VV VI SI+EQTNLLALNAAIEAARAGE GRGFAVVADEVR LA R 
Sbjct: 313 IQKLAEDSQKINGVVSVIHSIAEQTNLLALNAAIEAARAGEMGRGFAVVADEVRNLAKRV 372

Query: 476 QESTKQILQTVQRLQQSSRDSANLIEQGVSGASKAVEKARLAGTALSQITANVDRISTMN 535
           Q ST +I + V  LQ  +RD+ + +++    A   V++A+ AG AL++IT  V ++   N
Sbjct: 373 QSSTDEITRMVSALQDGTRDAVDFMQESSFKADDCVQQAQEAGAALAEITGAVAQMRESN 432

Query: 536 TQIATASEEQSAVTEEINKNIITISEISNQTALGAQQSSEATLELARLAESMQQEVAR 593
           TQIA A+E+QS V EE+N+ +++I +++  T      S+  + ELA LA  + + + +
Sbjct: 433 TQIAVAAEQQSHVAEEMNRAVVSIRDVTENTVQQTVDSATTSNELATLAGELSKAIGQ 490