Pairwise Alignments

Query, 596 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 620 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella loihica PV-4

 Score =  233 bits (594), Expect = 2e-65
 Identities = 137/340 (40%), Positives = 202/340 (59%), Gaps = 1/340 (0%)

Query: 256 IVTTSLALLIAKRVNNAVHHLASSATHI-AAGDLTQRIPVTGNDEFSDIAKYVNRIVTSF 314
           +V     L I + +   V  ++ + + I A  DLT R     +DE   IA++ N +V SF
Sbjct: 279 LVLIGFTLAIIRSIMEPVQRISDAISRIEATKDLTLRCDTKVDDEIGQIARHFNSMVESF 338

Query: 315 QEVISSNRHSVSALATAAEENAAVAMQTKQNIVEQQSQTQQIAAAIHQFTATVHEVAQSA 374
           Q +I     SV  +  + +E +  +M+  + +  Q ++T  +A AI +  AT+ E+A + 
Sbjct: 339 QSLIREVLTSVEVVNHSCQELSENSMRASEGVGRQLNETDMVATAITEMGATIDEIASNT 398

Query: 375 GLAAEASEEAEQAAMQGRKVVEENIAMIEGLSNDLQKMLAAMQLLAKDSEDIGSVVDVIQ 434
            LAAE +      A QG+  VE  I  I+ L+  L      +  L KDSE IGSV+DVI+
Sbjct: 399 ELAAERAGNTHDNAQQGQVGVEHTIEKIQALAAQLTDSAQVVSELEKDSETIGSVLDVIR 458

Query: 435 SISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLASRTQESTKQILQTVQRLQQSSR 494
            I+EQTNLLALNAAIEAARAGEQGRGFAVVADEVR+LA RTQEST++I   +Q LQ  +R
Sbjct: 459 GIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLAMRTQESTEEIAGIIQTLQSRTR 518

Query: 495 DSANLIEQGVSGASKAVEKARLAGTALSQITANVDRISTMNTQIATASEEQSAVTEEINK 554
               L+E       ++ ++A  AG  L QI A+V  I  M+TQIA A EEQS V  E+NK
Sbjct: 519 SIVQLMEATQRQGIESADQAASAGALLEQINADVTNIMDMSTQIAAAIEEQSMVASEVNK 578

Query: 555 NIITISEISNQTALGAQQSSEATLELARLAESMQQEVARY 594
           N++ I +I+ ++A  A ++++A+ ++    + + Q V+ +
Sbjct: 579 NVVVIRDIAAESAQAADENAKASDDVKARTQVLYQAVSLF 618