Pairwise Alignments

Query, 596 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 638 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella loihica PV-4

 Score =  227 bits (578), Expect = 1e-63
 Identities = 134/353 (37%), Positives = 209/353 (59%), Gaps = 7/353 (1%)

Query: 244 IWMVSLLGAFALIVTTSLALLIAKRVNNAVHHLASSATHIAAG--DLTQRIPVTGNDEFS 301
           +W V +  AF       L+  ++  V+  +  +A     I  G  DL QR+PV GNDE +
Sbjct: 289 VWTVLIAAAFI-----GLSTFVSASVSQPIAKVADMLQDIGQGEGDLRQRLPVEGNDELA 343

Query: 302 DIAKYVNRIVTSFQEVISSNRHSVSALATAAEENAAVAMQTKQNIVEQQSQTQQIAAAIH 361
            +AK  N  +   Q  I     +   L+ AA++ A  A QT+ +   Q+ QT  +  AI+
Sbjct: 344 QLAKGFNSFIEKIQHSIIEVTDTSVQLSHAAKDVANQAQQTQDDSQLQKDQTMMVVTAIN 403

Query: 362 QFTATVHEVAQSAGLAAEASEEAEQAAMQGRKVVEENIAMIEGLSNDLQKMLAAMQLLAK 421
           +  ATVHE+A +A  AA+ +++A+ A+  G+ VV      I  LS D++++   ++ LA 
Sbjct: 404 EMGATVHEIAGNAAQAADNAKDADNASSNGQIVVTRARDTINQLSQDVEQVGNVIESLAT 463

Query: 422 DSEDIGSVVDVIQSISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLASRTQESTKQ 481
            +  IGS++DVI+++S+QTNLLALNAAIEAARAGE GRGFAVVA+EVR LASRT  ST +
Sbjct: 464 HTTSIGSILDVIRAVSDQTNLLALNAAIEAARAGEAGRGFAVVAEEVRNLASRTAASTDE 523

Query: 482 ILQTVQRLQQSSRDSANLIEQGVSGASKAVEKARLAGTALSQITANVDRISTMNTQIATA 541
           + + +  LQ  +  +   + Q  S + + V+    A   L++I+  +  I+ MN Q+A A
Sbjct: 524 VQKMIDNLQSEAARAVEAMTQSKSRSQEGVQAVDEASHTLTEISQQIGAITDMNIQVAAA 583

Query: 542 SEEQSAVTEEINKNIITISEISNQTALGAQQSSEATLELARLAESMQQEVARY 594
           +EEQS V E+IN+N+  ISEI+ +T+  +Q  ++A+  L +LA  +   VA +
Sbjct: 584 TEEQSTVVEDINRNVTEISEITQRTSETSQAVAQASQSLNQLAHRLDTLVAGF 636