Pairwise Alignments

Query, 596 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 541 a.a., methyl-accepting chemotaxis protein (NCBI) from Shewanella oneidensis MR-1

 Score =  265 bits (677), Expect = 4e-75
 Identities = 162/445 (36%), Positives = 262/445 (58%), Gaps = 12/445 (2%)

Query: 157 LATVLDVQEKAVIQTLKEKLDQVTRQGFEPALQQLKAEKYDAAN------LILLQVINPL 210
           LAT L  +E  + Q     L     Q  E  +  L++   D A+      L L QVI+P+
Sbjct: 100 LATELTKEESQLTQQAAP-LFTAANQQIEQLVSYLRSFNGDVAHQLNDKILPLYQVIDPI 158

Query: 211 YNEIKKAAEAFLDIQTQEGKNNFSASQHEINQFIWMVSLLGAFALIVTTSLALLIAKRVN 270
            + I +     + I  +E   +       I  FI +  L    A++++  + L + + V 
Sbjct: 159 SSTISELTALQIKIADKEIAVDKELYDSSITIFITLAGL----AILLSILIGLWVKRSVM 214

Query: 271 NAVHHLASSATHIAA-GDLTQRIPVTGNDEFSDIAKYVNRIVTSFQEVISSNRHSVSALA 329
           N ++ +  +   I    DLT +     +DE   I+  + +++   + ++ S   + + + 
Sbjct: 215 NPINDIVRNLKTIRQDSDLTVKFHTFNDDELGLISTSLTQVIEHLRGILHSIAEAANTVT 274

Query: 330 TAAEENAAVAMQTKQNIVEQQSQTQQIAAAIHQFTATVHEVAQSAGLAAEASEEAEQAAM 389
           ++A E ++   +T + + +QQ++T+Q A A+++ TATV EVAQS   AA ++++A+  A 
Sbjct: 275 SSATELSSFTQETNKRMQQQQAETEQTATAMNEMTATVAEVAQSTSAAANSAKDADTYAA 334

Query: 390 QGRKVVEENIAMIEGLSNDLQKMLAAMQLLAKDSEDIGSVVDVIQSISEQTNLLALNAAI 449
            G ++V ++I+ +  LS  +QK    +  L+ +S++IG V+DVI+SI+EQTNLLALNAAI
Sbjct: 335 NGNRIVIDSISSMSQLSEQIQKTAQVIGFLSNESQNIGRVLDVIKSIAEQTNLLALNAAI 394

Query: 450 EAARAGEQGRGFAVVADEVRTLASRTQESTKQILQTVQRLQQSSRDSANLIEQGVSGASK 509
           EAARAGEQGRGFAVVADEVRTLA RTQ+ST++I   +  LQQ  + + + +E G+     
Sbjct: 395 EAARAGEQGRGFAVVADEVRTLAQRTQKSTQEIEAMIATLQQGVKQAVSAMEVGIKQVDD 454

Query: 510 AVEKARLAGTALSQITANVDRISTMNTQIATASEEQSAVTEEINKNIITISEISNQTALG 569
           A  KA  AG AL +I A+VD I+ +NT IATA+EEQS+V E IN++II IS+I++     
Sbjct: 455 ANNKANQAGQALKEIVASVDNIAELNTHIATAAEEQSSVAENINRSIIAISDITDDATRS 514

Query: 570 AQQSSEATLELARLAESMQQEVARY 594
           A + SE+ + L +LA SM+ +V+ +
Sbjct: 515 ALELSESVINLTKLANSMRSQVSAF 539