Pairwise Alignments

Query, 596 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 634 a.a., methyl-accepting chemotaxis protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  245 bits (625), Expect = 5e-69
 Identities = 144/363 (39%), Positives = 221/363 (60%), Gaps = 2/363 (0%)

Query: 234 SASQHEINQFIWMVSLLGAFALIVTTSLALLIAKRVNNAVHHLASSATHIAAG--DLTQR 291
           S S+  ++   + + ++G  A ++ T++A  IAK +   +    ++   IA G  DLT+R
Sbjct: 270 SHSEQAMSDIRFKLIMIGFIAFLIGTAIAWFIAKSITRPIAETTNALNDIAEGEGDLTRR 329

Query: 292 IPVTGNDEFSDIAKYVNRIVTSFQEVISSNRHSVSALATAAEENAAVAMQTKQNIVEQQS 351
           I V   DE + +A   NR        ++    S S LAT+AEE +A+  +T+Q    Q  
Sbjct: 330 IEVKSKDEIAQLALAFNRFAEKIHATVAQVSDSTSLLATSAEEMSAITNETQQMAKRQHL 389

Query: 352 QTQQIAAAIHQFTATVHEVAQSAGLAAEASEEAEQAAMQGRKVVEENIAMIEGLSNDLQK 411
           +T+Q+A A+++  ATV EVA +A  AA+A+  A ++   G+ +VE+ I+ I  L++++  
Sbjct: 390 ETEQVATAMNEMAATVQEVAHNATDAADAATHASESTEHGKLLVEKVISTISLLADEIAH 449

Query: 412 MLAAMQLLAKDSEDIGSVVDVIQSISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTL 471
              A+  L +++  I SV+ VI++I++QTNLLALNAAIEAARAGEQGRGFAVVADEVRTL
Sbjct: 450 AAKAINELERNTAQIDSVLVVIRNIADQTNLLALNAAIEAARAGEQGRGFAVVADEVRTL 509

Query: 472 ASRTQESTKQILQTVQRLQQSSRDSANLIEQGVSGASKAVEKARLAGTALSQITANVDRI 531
           ASRTQ ST +I Q ++ LQ S++ + + +    +     V     AG AL  IT  V  I
Sbjct: 510 ASRTQASTSEIQQMIEALQHSAKSTVSTMNTSTATTQNCVSLVHEAGEALEAITQAVSTI 569

Query: 532 STMNTQIATASEEQSAVTEEINKNIITISEISNQTALGAQQSSEATLELARLAESMQQEV 591
           S MN QIA+A+ EQ AV+ EINKN+  I++I+      A Q++ A  ELA+L+  +   +
Sbjct: 570 SQMNIQIASAANEQCAVSAEINKNVNNINDITINATESAVQTARAGDELAQLSMRLTTLL 629

Query: 592 ARY 594
           A++
Sbjct: 630 AQF 632