Pairwise Alignments

Query, 596 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 673 a.a., methyl-accepting chemotaxis protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  242 bits (618), Expect = 3e-68
 Identities = 160/453 (35%), Positives = 262/453 (57%), Gaps = 27/453 (5%)

Query: 151 IVDNEILATVLDVQEKAVIQTLKEKLDQVTRQGFEPALQQLKAEKYDAANLILLQ----V 206
           IVD + L ++   Q+   + TL E  D + +Q       QL   +  +  L +++    V
Sbjct: 237 IVDADTLESIN--QDVKKVLTLLEGSDSMVQQ----KANQLNHAQAASNQLAIIEKDVKV 290

Query: 207 INPLYNEIKKAAEAFLDIQTQEGKNNFSASQHEINQFIWMVSLLGAFALIVTTSLALLIA 266
           I+    E+    EA     +Q      + +Q +   F  M+ +L A  + +  S A++  
Sbjct: 291 IDRNMEEVSDNIEAVAAQMSQA-----TITQIDAASFRTMIVVLIAIVVAIIISFAVVTP 345

Query: 267 -----KRVNNAVHHLASSATHIAAGDLTQRIPVTGNDEFSDIAKYVNRIVTSFQEVISSN 321
                 +VNNA++ LAS       G+LT ++  +  DEF+++AK  NR+V S + +I+  
Sbjct: 346 LKRSLNQVNNALNVLAS-------GNLTHKLDDSSQDEFAELAKNCNRLVDSLRGLIAGI 398

Query: 322 RHSVSALATAAEENAAVAMQTKQNIVEQQSQTQQIAAAIHQFTATVHEVAQSAGLAAEAS 381
               + LA AAE+ +A+  QT   I EQ+SQ  Q+A A  + +++  +V+ SA  A    
Sbjct: 399 LDRSNQLAAAAEQTSAITAQTTTGIQEQKSQVDQVATATTELSSSAQQVSMSANDALAQI 458

Query: 382 EEAEQAAMQGRKVVEENIAMIEGLSNDLQKMLAAMQLLAKDSEDIGSVVDVIQSISEQTN 441
           ++A+Q A   R + EEN   I  L+ ++ K    +  +  DS  IGS++DVI+ I+EQTN
Sbjct: 459 KQADQEAKHMRAIAEENKHTILALAEEVAKAGQVINKVHSDSAAIGSILDVIRGIAEQTN 518

Query: 442 LLALNAAIEAARAGEQGRGFAVVADEVRTLASRTQESTKQILQTVQRLQQSSRDSANLIE 501
           LLALNAAIEAARAGEQGRGFAVVADEVR+LASRTQ ST++I Q ++ LQQ ++ +   ++
Sbjct: 519 LLALNAAIEAARAGEQGRGFAVVADEVRSLASRTQVSTREIQQMIEVLQQGAQQAVAAMD 578

Query: 502 QGVSGASKAVEKARLAGTALSQITANVDRISTMNTQIATASEEQSAVTEEINKNIITISE 561
            G + A+  V+K   A  AL  I+ +V +     T IA A++EQ+ V++++++ +  I+ 
Sbjct: 579 MGRAQANACVQKTEQANLALETISQSVHKAYDAGTHIAHAAQEQNLVSQQVSEKLEHIAA 638

Query: 562 ISNQTALGAQQSSEATLELARLAESMQQEVARY 594
           IS +TA+GA Q+++++ ++A+LAE +Q  V  +
Sbjct: 639 ISEETAIGADQTAQSSHQVAKLAEELQASVGEF 671