Pairwise Alignments

Query, 596 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 634 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella sp. ANA-3

 Score =  251 bits (640), Expect = 8e-71
 Identities = 146/353 (41%), Positives = 220/353 (62%), Gaps = 2/353 (0%)

Query: 234 SASQHEINQFIWMVSLLGAFALIVTTSLALLIAKRVNNAVHHLASSATHIAAG--DLTQR 291
           S S+  ++     + ++G  AL++ T++A  IAK +   +     +   IA G  DLT+R
Sbjct: 270 SHSEQAMSDIRLKLIMIGVIALLIGTAIAWFIAKSITRPIAETTDALNDIAEGEGDLTRR 329

Query: 292 IPVTGNDEFSDIAKYVNRIVTSFQEVISSNRHSVSALATAAEENAAVAMQTKQNIVEQQS 351
           I V   DE + +A+  NR        ++    S S LAT+AEE +A+  +T+Q    Q  
Sbjct: 330 IEVKSKDEMAQLAQAFNRFAEKIHATVAQVSDSTSLLATSAEEMSAITHETQQMANRQHL 389

Query: 352 QTQQIAAAIHQFTATVHEVAQSAGLAAEASEEAEQAAMQGRKVVEENIAMIEGLSNDLQK 411
           +T+Q+A A+++  ATV EVA +A  AA+A+  A ++  QG+ +VE+ I+ I  L++++ +
Sbjct: 390 ETEQVATAMNEMAATVQEVAHNATDAADAATHASESTEQGKLLVEKVISTISLLADEIAQ 449

Query: 412 MLAAMQLLAKDSEDIGSVVDVIQSISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTL 471
              A+  L +++  I SV+ VI++I++QTNLLALNAAIEAARAGEQGRGFAVVADEVRTL
Sbjct: 450 AANAINELERNTTQIDSVLVVIRNIADQTNLLALNAAIEAARAGEQGRGFAVVADEVRTL 509

Query: 472 ASRTQESTKQILQTVQRLQQSSRDSANLIEQGVSGASKAVEKARLAGTALSQITANVDRI 531
           ASRTQ ST +I Q ++ LQQS++ + + +    +     V     AG+AL  IT  V  I
Sbjct: 510 ASRTQASTTEIQQMIETLQQSAKATVSSMNTSTATTQSCVSLVHEAGSALEAITQAVSTI 569

Query: 532 STMNTQIATASEEQSAVTEEINKNIITISEISNQTALGAQQSSEATLELARLA 584
           S MN QIA+A+ EQ AV+ EINKN+  I++I+      A Q++ A  ELA+L+
Sbjct: 570 SQMNIQIASAANEQCAVSAEINKNVNNINDIATNATESAMQTARAGDELAQLS 622