Pairwise Alignments

Query, 596 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 673 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella sp. ANA-3

 Score =  243 bits (620), Expect = 2e-68
 Identities = 130/341 (38%), Positives = 220/341 (64%)

Query: 254 ALIVTTSLALLIAKRVNNAVHHLASSATHIAAGDLTQRIPVTGNDEFSDIAKYVNRIVTS 313
           A++    ++  +   +  +++ + ++   +A+G+LT ++  +G+DEF+++AK  NR+V S
Sbjct: 331 AIVAAVIISFAVVAPLKRSLYQVNNALNVLASGNLTHKLDDSGHDEFAELAKNCNRLVDS 390

Query: 314 FQEVISSNRHSVSALATAAEENAAVAMQTKQNIVEQQSQTQQIAAAIHQFTATVHEVAQS 373
            + +I       + LA AAE+ +A+  QT   I EQ+SQ  Q+A A  + +++  +V+ S
Sbjct: 391 LRGLIVGILDRSNQLAAAAEQTSAITAQTTSGIQEQKSQVDQVATATTELSSSAQQVSMS 450

Query: 374 AGLAAEASEEAEQAAMQGRKVVEENIAMIEGLSNDLQKMLAAMQLLAKDSEDIGSVVDVI 433
           A  A    ++A+Q A   R + EEN   I  L++++ K    +  +  DS  IGS++DVI
Sbjct: 451 ADDALAQIKQADQEAKHMRTIAEENKRTILALADEVAKAGQVINKVQSDSASIGSILDVI 510

Query: 434 QSISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLASRTQESTKQILQTVQRLQQSS 493
           + I+EQTNLLALNAAIEAARAGEQGRGFAVVADEVR+LASRTQ ST++I Q ++ LQQ +
Sbjct: 511 RGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLASRTQVSTREIQQMIEVLQQGA 570

Query: 494 RDSANLIEQGVSGASKAVEKARLAGTALSQITANVDRISTMNTQIATASEEQSAVTEEIN 553
           + +   ++ G + A+  V+K   A  AL  I+ +V +     T IA A++EQ+ V+++++
Sbjct: 571 QQAVAAMDMGRAQANACVDKTEQANLALETISQSVHKAYDAGTHIAHAAQEQNVVSQQVS 630

Query: 554 KNIITISEISNQTALGAQQSSEATLELARLAESMQQEVARY 594
           + +  I+ IS +TA+GA Q+++++ ++A+LAE +Q  V  +
Sbjct: 631 EKLEHIAAISEETAIGADQTAQSSHQVAKLAEELQASVGEF 671