Pairwise Alignments

Query, 596 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 541 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella sp. ANA-3

 Score =  270 bits (689), Expect = 1e-76
 Identities = 162/445 (36%), Positives = 262/445 (58%), Gaps = 12/445 (2%)

Query: 157 LATVLDVQEKAVIQTLKEKLDQVTRQGFEPALQQLKAEKYDAAN------LILLQVINPL 210
           L+T L  +E  + Q   E+L     +  E  +  L+    D  +      L L   I+P+
Sbjct: 100 LSTELTKEESQLAQQA-ERLFTPANEQIEQLITYLRGLNGDVVHQLNDKILPLYNAIDPI 158

Query: 211 YNEIKKAAEAFLDIQTQEGKNNFSASQHEINQFIWMVSLLGAFALIVTTSLALLIAKRVN 270
             ++ +  +  + I  QE        Q  I+ FI     L   A++++  + L + + V 
Sbjct: 159 SGKVSELIDLQIKIAGQEKDAVNGIYQSSISIFI----TLAGIAMLISIVIGLWVNRSVM 214

Query: 271 NAVHHLASSATHIAA-GDLTQRIPVTGNDEFSDIAKYVNRIVTSFQEVISSNRHSVSALA 329
           N +  +  +   I    DLT +     +DE   I+  + +++   + ++ S   + + + 
Sbjct: 215 NPIRDIVENLKTIRQDSDLTVKFKTFNDDELGQISTSLTQVIEHLRGILHSIAEAANTVN 274

Query: 330 TAAEENAAVAMQTKQNIVEQQSQTQQIAAAIHQFTATVHEVAQSAGLAAEASEEAEQAAM 389
           ++A E ++    T + + +QQ++T+Q A A+++ TATV EVAQSA  AA+++++A+  A 
Sbjct: 275 SSATELSSFTQATNKRMQQQQAETEQTATAMNEMTATVAEVAQSAAAAADSAKDADSYAA 334

Query: 390 QGRKVVEENIAMIEGLSNDLQKMLAAMQLLAKDSEDIGSVVDVIQSISEQTNLLALNAAI 449
            G  +V ++I  +  LS  +QK    +  L+ +S++IG V+DVI+SI+EQTNLLALNAAI
Sbjct: 335 NGNHIVMQSITSMSQLSEQIQKTAQVIGFLSNESQNIGRVLDVIKSIAEQTNLLALNAAI 394

Query: 450 EAARAGEQGRGFAVVADEVRTLASRTQESTKQILQTVQRLQQSSRDSANLIEQGVSGASK 509
           EAARAGEQGRGFAVVADEVRTLA RTQ+ST++I   +  LQQ  +++ N +E G++    
Sbjct: 395 EAARAGEQGRGFAVVADEVRTLAQRTQKSTQEIEAMIATLQQGVKEAVNAMEVGINQVDD 454

Query: 510 AVEKARLAGTALSQITANVDRISTMNTQIATASEEQSAVTEEINKNIITISEISNQTALG 569
           A +KA  AG AL +I A+VD I+ +NT IATA+EEQS+V E IN++II IS+I+  +   
Sbjct: 455 ANDKANQAGQALKEIVASVDNITELNTHIATAAEEQSSVAESINRSIIAISDIAEHSTNS 514

Query: 570 AQQSSEATLELARLAESMQQEVARY 594
           A + SE+ L L +LA SM+ +V+ +
Sbjct: 515 ALELSESVLNLTKLANSMRNQVSAF 539