Pairwise Alignments

Query, 596 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 533 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella sp. ANA-3

 Score =  225 bits (574), Expect = 3e-63
 Identities = 134/360 (37%), Positives = 219/360 (60%), Gaps = 4/360 (1%)

Query: 239 EINQFIWM-VSLLGAFALIVTTSLALL---IAKRVNNAVHHLASSATHIAAGDLTQRIPV 294
           +I   IW    L+G   LI+   +A L   I++ +   +  + ++   IA G+LT ++ V
Sbjct: 172 DIENTIWHEYVLMGGTTLILILLMAALGYIISRSIVQPLDQVNNAMQIIATGNLTPQLAV 231

Query: 295 TGNDEFSDIAKYVNRIVTSFQEVISSNRHSVSALATAAEENAAVAMQTKQNIVEQQSQTQ 354
           TG DE + +A  +N+ + S +  ++   HS   ++ AA   A+ A +T Q +  Q+ Q  
Sbjct: 232 TGKDELAALAHNINQSMASIRTALAEANHSADNVSQAASRIASTAEETNQAVNNQRDQLA 291

Query: 355 QIAAAIHQFTATVHEVAQSAGLAAEASEEAEQAAMQGRKVVEENIAMIEGLSNDLQKMLA 414
           Q+A A+++ +AT+ +VA +A   A+ ++EA + A  G K V  ++  I  L+ ++++   
Sbjct: 292 QLATAMNEMSATIADVANNAESTAKDTKEATREAGLGDKDVHASVDGIHALAKEVEQATQ 351

Query: 415 AMQLLAKDSEDIGSVVDVIQSISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLASR 474
            +  L ++   I  V  VI +IS+QTNLLALNAAIEAARAGEQGRGFAVVADEVR LASR
Sbjct: 352 QVNKLKEEIMQISEVTAVISAISDQTNLLALNAAIEAARAGEQGRGFAVVADEVRQLASR 411

Query: 475 TQESTKQILQTVQRLQQSSRDSANLIEQGVSGASKAVEKARLAGTALSQITANVDRISTM 534
           T++ST++I  T+  LQQ +  +AN ++     A K+V+++  AG  LS I  ++  +S M
Sbjct: 412 TRQSTEEIQNTISLLQQRAVSAANAMDTSRDLAEKSVDQSTKAGNDLSLIVTHIKHVSDM 471

Query: 535 NTQIATASEEQSAVTEEINKNIITISEISNQTALGAQQSSEATLELARLAESMQQEVARY 594
            TQIATA+EEQSAV EE+N+N+  I+  + + +  A   ++ +  LA L+ ++  ++A +
Sbjct: 472 ATQIATAAEEQSAVAEEMNRNVCGINSSALEVSESATYLAQESESLAELSLNLNNKLAAF 531