Pairwise Alignments

Query, 596 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 664 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella sp. ANA-3

 Score =  226 bits (576), Expect = 2e-63
 Identities = 142/364 (39%), Positives = 214/364 (58%), Gaps = 6/364 (1%)

Query: 233 FSASQHEINQFIWMVSLLGAFALIVTTSLALLIAKRVNNAVHHLASSATHIAAG-DLTQR 291
           F+A++H    F  +V+L     L++  SL+++  + ++++VHH+ S+ T      DL+ R
Sbjct: 304 FTANKH---MFFVLVTLTVVLVLVLLLSLSVI--RYLHDSVHHVYSTVTKARKHYDLSVR 358

Query: 292 IPVTGNDEFSDIAKYVNRIVTSFQEVISSNRHSVSALATAAEENAAVAMQTKQNIVEQQS 351
           +    +DEF ++A   N ++  F+ VI   R S S L  A E+        +Q+++   S
Sbjct: 359 LTQNSSDEFGELAIAFNDMMNDFESVILQVRASASKLQQAVEQMDVCTHAMEQDVMAGHS 418

Query: 352 QTQQIAAAIHQFTATVHEVAQSAGLAAEASEEAEQAAMQGRKVVEENIAMIEGLSNDLQK 411
           + +Q+A+A+ + +ATV E+A +A  A+EAS  A   A  G   V    A I+ L+ND+  
Sbjct: 419 EAEQVASAMTEMSATVAEIASNAVNASEASTAANHEAKAGNIEVGRTSAAIKALANDIDG 478

Query: 412 MLAAMQLLAKDSEDIGSVVDVIQSISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTL 471
              A+  L ++   I  V+DVI  I+EQTNLLALNAAIEAARAGE GRGFAVVADEVR+L
Sbjct: 479 ASKAINELDREIHGIVVVLDVISGIAEQTNLLALNAAIEAARAGEMGRGFAVVADEVRSL 538

Query: 472 ASRTQESTKQILQTVQRLQQSSRDSANLIEQGVSGASKAVEKARLAGTALSQITANVDRI 531
           A R+Q ST  I     RL+  +  +   +E+G+  A+ +V +A  AG  L +I   VD I
Sbjct: 539 AQRSQTSTSDIKNMTDRLKSGASIAVKAMERGLMQANNSVHEAEQAGIELKRIVEQVDII 598

Query: 532 STMNTQIATASEEQSAVTEEINKNIITISEISNQTALGAQQSSEATLELARLAESMQQEV 591
             MN QIATA+ EQSAV+E++N+N + ISEI   T   + +  E T  L   A  M +EV
Sbjct: 599 DRMNEQIATATHEQSAVSEDVNRNALKISEIYLNTQRISDELRELTKALTYDAALMSKEV 658

Query: 592 ARYN 595
            +++
Sbjct: 659 NKFH 662