Pairwise Alignments

Query, 596 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 543 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella sp. ANA-3

 Score =  224 bits (570), Expect = 9e-63
 Identities = 147/432 (34%), Positives = 239/432 (55%), Gaps = 24/432 (5%)

Query: 170 QTLKEKLDQVTRQGFEPA--LQQLKAEKYDAANLILLQVINPLYNEIKKAAE---AFLDI 224
           Q   E ++ V    FE A  L + K++K         + +  +YN   +AA+     LD+
Sbjct: 126 QASSEVINAVKNNDFELARQLHENKSKKE-------FKALRSIYNAAGEAADNRVKELDL 178

Query: 225 QTQEGKNNFSASQHEINQFIWMVSLLGAFALIVTTSLALLIAKRVNNAVHHLASSATHIA 284
           Q  E     + +Q +I+  + + +L+   AL++    A    K + NA+  +      I 
Sbjct: 179 QASEQ----ATTQTQIS--VTIATLVAIVALVI----AYFGPKIIVNAIRDITDRINDIV 228

Query: 285 AGD--LTQRIPVTGNDEFSDIAKYVNRIVTSFQEVISSNRHSVSALATAAEENAAVAMQT 342
            GD  LTQRIP+T  DE  ++A   N  V   Q+++ +       ++   E  A  +  T
Sbjct: 229 DGDGNLTQRIPITRQDEIGELANAFNLFVAQLQQMVIAIISQTKDVSQTVENLATKSTTT 288

Query: 343 KQNIVEQQSQTQQIAAAIHQFTATVHEVAQSAGLAAEASEEAEQAAMQGRKVVEENIAMI 402
                EQ+     I  A+++ +A V EVA +A   A    +     ++G+ ++ +++  I
Sbjct: 289 IGISYEQEQFVDTIVTAVNEMSAAVREVASNALHTATEITKVNDQTIEGKNILTQSVNHI 348

Query: 403 EGLSNDLQKMLAAMQLLAKDSEDIGSVVDVIQSISEQTNLLALNAAIEAARAGEQGRGFA 462
           + LS  +++ +A ++ L+ +S +I SV+DVI+SI+EQTNLLALNAAIEAARAGEQGRGFA
Sbjct: 349 QQLSESVKQAVAVIEKLSVNSANIASVLDVIRSIAEQTNLLALNAAIEAARAGEQGRGFA 408

Query: 463 VVADEVRTLASRTQESTKQILQTVQRLQQSSRDSANLIEQGVSGASKAVEKARLAGTALS 522
           VVADEVRTLASRT+ ST+ I + ++ LQ+   D+   IE G S  +  V  A     AL 
Sbjct: 409 VVADEVRTLASRTETSTQDIQRMIEELQRGVNDAVKSIESGASLTNSTVTLASQTQDALD 468

Query: 523 QITANVDRISTMNTQIATASEEQSAVTEEINKNIITISEISNQTALGAQQSSEATLELAR 582
           +I  +  ++S M+TQ ATA+EEQ+ VTEEIN+N+  +S+ +       Q++ +  +    
Sbjct: 469 EILNSTSKVSEMSTQTATATEEQTHVTEEINRNLTELSDKTRYCNTVIQETQQIVVNTQT 528

Query: 583 LAESMQQEVARY 594
           +  ++Q+EV+R+
Sbjct: 529 ICSNLQKEVSRF 540