Pairwise Alignments

Query, 257 a.a., EAL domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 595 a.a., diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) from Pseudomonas fluorescens FW300-N2E2

 Score =  112 bits (280), Expect = 2e-29
 Identities = 66/217 (30%), Positives = 110/217 (50%), Gaps = 4/217 (1%)

Query: 30  FQPIVNCRTKEIFGYEALVRGLNNESAYSVISRVNEDNRY----LFDQMCRVKAIALAAK 85
           FQPI+    + I GYEAL RG +N   +S I+ ++   +       +  CR  A     +
Sbjct: 23  FQPIICLSERRIVGYEALTRGPSNSPLHSPIALLSVARQAGRLSELELACRRSACQRFNE 82

Query: 86  LGLTSKLSINFLPNAIYVPERCIRTTLEAAKRYQFPIENIMFEFTEAERVEDVNHIKRIV 145
             L  KL +N  P ++         TL+  +        ++ E TE   ++D   ++  +
Sbjct: 83  QKLPGKLFLNVSPESLLESAHQTGRTLQLLQDLGIAPSQVVIELTEQTPIDDFQLLQTAL 142

Query: 146 EYYKSLGFQTAIDDFGSGYSGLNLLADFQTNIVKVDMGLIRNIHADQVRQSIMKNCLKLF 205
            +Y+++GF  A+DD G+GYS L L ++ + + VK+D   I  IH D +++  + + LK+ 
Sbjct: 143 HHYRAMGFSIALDDLGAGYSSLRLWSELRPDYVKIDRHFIDGIHQDALKREFVGSILKIA 202

Query: 206 SDLNIQPLAEGVESHAEFAWLKAAGVELMQGYYFAKP 242
                Q +AEG+E   E A L   GV+L+QGY  A+P
Sbjct: 203 RASRAQVIAEGIELPEELAVLIEMGVDLVQGYLLARP 239