Pairwise Alignments

Query, 257 a.a., EAL domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1484 a.a., diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) (RefSeq) from Shewanella loihica PV-4

 Score = 97.8 bits (242), Expect = 1e-24
 Identities = 65/229 (28%), Positives = 119/229 (51%), Gaps = 13/229 (5%)

Query: 25   DFTMAFQPIVNC-RTKEIFGYEALVRGLNNESAY---SVISRVNED-------NRYLFDQ 73
            +F + FQP ++  +  ++ G EAL+R  + +  Y    +  RV E        +R++  Q
Sbjct: 1243 EFELYFQPQIDILKDDKVVGMEALLRWHHPKEGYIRPDIFIRVAESCGLIIEIDRWVIKQ 1302

Query: 74   MCRVKAIALAAKLGLTSKLSINFLPNAIYVPERCIRTTLEAAKRYQFPIENIMFEFTEAE 133
             C ++    A   G   KLS+N        P+  I+   +A K    P + +  E TE  
Sbjct: 1303 AC-LQGAKWAEHFGDELKLSVNVSAVHFRQPD-FIQDVQQALKESGMPAKMLGLEITEGV 1360

Query: 134  RVEDVNHIKRIVEYYKSLGFQTAIDDFGSGYSGLNLLADFQTNIVKVDMGLIRNIHADQV 193
             +++++  K  ++  + +G + AIDDFG+GYS L  L  F  + +K+D   + +I  ++ 
Sbjct: 1361 LMKELHVAKDHLKALREIGIEVAIDDFGTGYSSLAYLRSFDVSTLKIDRSFLIDIATNEA 1420

Query: 194  RQSIMKNCLKLFSDLNIQPLAEGVESHAEFAWLKAAGVELMQGYYFAKP 242
             Q+I  + ++L  +L ++ +AEGVE+  +   + + G  ++QGYYFAKP
Sbjct: 1421 DQAIASSIIELARNLKLKVVAEGVETQEQLEQVFSRGCYIIQGYYFAKP 1469