Pairwise Alignments

Query, 257 a.a., EAL domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 684 a.a., GGDEF domain protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 96.7 bits (239), Expect = 1e-24
 Identities = 67/227 (29%), Positives = 111/227 (48%), Gaps = 14/227 (6%)

Query: 25  DFTMAFQPIVNCRTKEIFGYEALVRGLNNESAYSVIS--RVNEDN-------RYLFDQMC 75
           +F + FQP ++ +T +I G EAL+R   +    S +S   V E+        R++ +Q C
Sbjct: 436 EFLLYFQPKLDLQTGKITGCEALIRWQKDGRLISPMSFIPVAEETGIIIPIGRWVIEQSC 495

Query: 76  RVKAIALAAKLGLTSKLSINFLPNAIYVPERCIRTTLEAAKRYQFPIENIMFEFTEAERV 135
           RV       K      ++IN + +  +     +    + A RYQ   E +  E TE   +
Sbjct: 496 RVLR-EWQKKYNYAIPIAIN-VASQQFADASLVSDIKQMALRYQIQPELLEIEITETSLM 553

Query: 136 EDVNHIKRIVEYYKSLGFQTAIDDFGSGYSGLNLLADFQTNIVKVDMGLIRNIHADQVRQ 195
            D+      +E  KS GF  A+DDFG+GYS L+ L       +K+D   + ++  D    
Sbjct: 554 NDIELAINKLEQLKSAGFGIAVDDFGTGYSSLSYLRHLPITTMKIDRCFVSDLPGD---S 610

Query: 196 SIMKNCLKLFSDLNIQPLAEGVESHAEFAWLKAAGVELMQGYYFAKP 242
           +I    L L   LN+  +AEG+E+  +  WLK+   ++ QG+YF++P
Sbjct: 611 AIASTILMLGKQLNLTIVAEGIENELQLDWLKSNECQIGQGFYFSQP 657