Pairwise Alignments

Query, 462 a.a., ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 448 a.a., Sensor protein PhoQ (EC 2.7.13.3) from Pseudomonas fluorescens FW300-N2E2

 Score =  158 bits (399), Expect = 4e-43
 Identities = 129/446 (28%), Positives = 211/446 (47%), Gaps = 31/446 (6%)

Query: 17  SLKTRLLLAAALWLGAMILAAGYLIPNLIHQYLLEDVQNQLQLSMDEI--TANLEANPQG 74
           SL+ RL+LAA       +LA    +       L E ++ +L   +  +   A +E N   
Sbjct: 4   SLRLRLMLAAMTLAVLFMLALLPAMQGAFSLALQESIEQRLASDVTTLISAARVENN--- 60

Query: 75  QLTLTTRLADPRFTQPYSGLYWSATLGDQTLRSRSLWDRFLTEETHVHGTIYLGAKEESL 134
           +L +  +L D RF    + L     + D+    R +W    T+E +++ T     +    
Sbjct: 61  RLRMPAQLPDERFNLADARLL--GYIYDR--EGRLVWRSKATQEENINYTPRYDGQGNQF 116

Query: 135 IVLKRT------VYLPEF------SQPITITIGLDDAPLKATLQRVSKELWMILALLFSG 182
             ++        VY  E       S   +I         + TLQ +   L++        
Sbjct: 117 ARIRENDGQEFFVYDVEIKLLGGQSAAFSIVTLQPVRDYEVTLQGLRDNLYLGFGAALLV 176

Query: 183 ILVLTGVQVTWSLRPLSKMQRELSALRDGQQNALNGDYPQEISPLVNDLNALLFHYQELL 242
           +L L  + +TW LR L ++ +EL  +  G + +L+ ++P+E+  L   LN LL+  +E  
Sbjct: 177 LLALLWIGLTWGLRALRRLSQELDEIESGARESLSTEHPRELLRLTGSLNRLLYSEREQR 236

Query: 243 ERARHHAGNLSHALKTPLSVLKNEVTQL----NDAQLRIQLQPSVEQIQQQIDYHLGRAR 298
            R R    +L+H+LKTPL+VL+     +     D      LQ  +E++ QQI Y L RA 
Sbjct: 237 SRYRDSLDDLAHSLKTPLAVLQGVSEDMARRPEDRGQAWVLQTQIERMSQQIGYQLQRAS 296

Query: 299 MAGSANIL-SVKTAPSARVDAISQAFDKVYAERGITLVNELDSDLEVAVEPTDLDEMIGN 357
           +  S  +   V+  P   + ++    DKVY ++ + +  +L    +V +E   L EM+GN
Sbjct: 297 LRKSGLVRHQVRLRPV--LQSLCDTLDKVYRDKRVNVSFDLPEHCQVPIEQGALLEMLGN 354

Query: 358 LLENSYKWANSLIRVH-SQILSDDWVQICVEDDGAGISATNREKALKRGVRLDETTPGTG 416
           LLEN+Y+     +RV   Q L     ++ VEDDG G+    R + L+RG RLD   PG G
Sbjct: 355 LLENAYRLCLGEVRVSVHQTLGG--TELSVEDDGPGVPPDQRARILQRGERLDRQHPGQG 412

Query: 417 LGLNIVSEMAHSYRGALALGESQLGG 442
           +GL +V ++  SY   L LG+S+LGG
Sbjct: 413 IGLAVVEDIIESYGAKLTLGDSELGG 438