Pairwise Alignments

Query, 462 a.a., ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 439 a.a., ATP-binding region, ATPase-like:Histidine kinase, HAMP region from Pseudomonas syringae pv. syringae B728a

 Score =  194 bits (492), Expect = 6e-54
 Identities = 141/422 (33%), Positives = 229/422 (54%), Gaps = 32/422 (7%)

Query: 45  IHQYLLEDVQNQLQLSMDEITANLEANPQGQLTLTTRLADPRFTQPYSGLYWSATLGDQT 104
           + +YL   ++N+     + +   L   P G L L        + +P SG Y+   L    
Sbjct: 35  LQRYLESGLRNE----SENLLVALVRGPAG-LQLDDHRLSGAYQRPLSGHYFRMDLPQGH 89

Query: 105 LRSRSLWDRFLTEE-THVHGTIYLGAKEESLIVLKRTVYLPEFSQPITITIGLDDAPLKA 163
            RSRSLWD  L +    +H  + LG   +SL++L  T    +F + ++IT+  D  P++A
Sbjct: 90  WRSRSLWDFELPQPGVGLHANLELGKTGQSLLML--TSEYRKFGKQVSITVAQDYTPVRA 147

Query: 164 T---LQRVSKELWMILALLFSGILVLTGVQVTWSLRPLSKMQRELSALRDGQQNALNGDY 220
           +   +Q++   L +   +L   +LVL  + V  +LRPL  ++ ++  L+ GQ++ L+   
Sbjct: 148 SFRLMQQIGLGLGLAALIL---VLVLQRITVRRALRPLETVREQIFQLQQGQRSQLDNQV 204

Query: 221 PQEISPLVNDLNALLFHYQELLERARHHAGNLSHALKTPLSVLKNEVT--QLN-DAQLRI 277
           P E+ PLV  +N LL H ++ L+R+R+  GNL HALKTPL+VL +     QL+ +  LR 
Sbjct: 205 PLELEPLVAQINHLLAHTEDSLKRSRNALGNLGHALKTPLAVLLSLALSGQLDANPALRR 264

Query: 278 QLQPSVEQIQQQIDYHLGRARMAGSANILSVKTAPSARVDAISQ---AFDKVYAERG--I 332
            LQ  +E I+ +++  L RAR++G A        P AR D  ++    F  +    G  +
Sbjct: 265 TLQEQLENIRLRLERELNRARLSGDA-------LPGARFDCDAELPGLFSTLGMIHGAHL 317

Query: 333 TLVNELDSDLEVAVEPTDLDEMIGNLLENSYKWANSLIRVHSQILSD-DWVQICVEDDGA 391
            LVN++++ + +  +  D+ E++GNLL+N+ KWA+S +R++  ILS      + V+DDG 
Sbjct: 318 QLVNDVEAGMYLPWDREDILELLGNLLDNACKWADSEVRLN--ILSQAQGFCLLVDDDGP 375

Query: 392 GISATNREKALKRGVRLDETTPGTGLGLNIVSEMAHSYRGALALGESQLGGLKATLTLKQ 451
           GI    R +   RG RLDE   G GLGL IV ++  ++ G L L ES  GGL+  + L +
Sbjct: 376 GIPEAQRAEVFSRGARLDEQITGHGLGLGIVRDIVEAWGGQLQLQESPAGGLRVRIDLPE 435

Query: 452 PT 453
            T
Sbjct: 436 RT 437