Pairwise Alignments

Query, 462 a.a., ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 466 a.a., sensor histidine kinase (RefSeq) from Shewanella amazonensis SB2B

 Score =  184 bits (467), Expect = 5e-51
 Identities = 138/451 (30%), Positives = 229/451 (50%), Gaps = 27/451 (5%)

Query: 16  LSLKTRLLLAAALWLGAMILAAGYLIPNLIHQYLLEDVQNQLQLSMDEITANLEANPQGQ 75
           LSLKTRL ++AA+ +  ++ A G  +     +  L   +++L   +  + A  +    G+
Sbjct: 28  LSLKTRLFVSAAILVALLLPALGIALFQAFERQALAGSRDELGALIYSVLAQTDVI-DGK 86

Query: 76  LTLTTRLADPRFTQPYSGLYWSAT--LGDQTLRSRSLWDRFLTE---------ETHVHGT 124
           L +   L +P+F    SGLY       G+   RS SL                +  V G 
Sbjct: 87  LEMPPFLNEPQFNVDGSGLYAEVRSGAGEVLWRSGSLIGHGAIPALPSPAPGADAKVFGE 146

Query: 125 IYLGAKEESLIVLKRTVYLPE--FSQPITITIGLDDAPLKATLQRVSKELWMILALLFSG 182
             L   +E L V+  T          P++I I       +  L      LW  L L  + 
Sbjct: 147 TLLN--DEPLFVMSFTAVYESKGVDVPLSIHILKSQQRYREALTEFESSLWRYLLLALAL 204

Query: 183 ILVLTGVQVTWSLRPLSKMQRELSALRDGQQNALNGDYPQEISPLVNDLNALLFHYQELL 242
           + V+ G+ + W+L+PLS+ + EL A+  G +  ++ DYP E+ PLV+ LN+LL   Q   
Sbjct: 205 LAVVLGLWLRWTLKPLSRFEAELKAVEHGDKERIDTDYPTELGPLVHQLNSLLTTEQNQR 264

Query: 243 ERARHHAGNLSHALKTPLSVLKNEVTQLNDAQLRIQLQPSVEQIQQQIDYHLGRARMAGS 302
           +R R+   +L+H+LKTPL+VL++    L+DA     +   V+ I   I + L RA+ AG+
Sbjct: 265 KRYRNALSDLAHSLKTPLAVLQSH-PGLDDA-----VMEQVDNISHSISHQLKRAQSAGA 318

Query: 303 AN-ILSVKTAPSARVDAISQAFDKVYAERGITLVNELDSDLEVAVEPTDLDEMIGNLLEN 361
           A+    V+  P A  + +++   K++ ++GI    +L ++L    +  DL E++GNLL+N
Sbjct: 319 ASWHQGVEILPQA--ERLTRTLSKIHGDKGIDFELKLAAELVFKGDKGDLTELLGNLLDN 376

Query: 362 SYKWANSLIRVHSQILSDDWVQICVEDDGAGISATNREKALKRGVRLDETTPGTGLGLNI 421
           + K A S + + S    D  +++ VEDDG G+  + R+K  +RG+R D    G G+GL I
Sbjct: 377 ACKAARSRVCL-SAAKQDGRLRLIVEDDGPGVDESMRDKIFERGIRADTYDKGHGIGLAI 435

Query: 422 VSEMAHSYRGALALGESQ-LGGLKATLTLKQ 451
           V ++  +Y+G L LG S  LGG +  ++  Q
Sbjct: 436 VQDLTDAYQGRLLLGRSDLLGGARFEVSFPQ 466