Pairwise Alignments

Query, 462 a.a., ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 445 a.a., sensor histidine kinase (RefSeq) from Shewanella amazonensis SB2B

 Score =  159 bits (403), Expect = 1e-43
 Identities = 126/451 (27%), Positives = 227/451 (50%), Gaps = 32/451 (7%)

Query: 16  LSLKTRLLLAAALWLGAMILAAG----YLIPNLIHQYLLEDVQNQLQLSMDEITANLEAN 71
           +S++ +L    +LWL  +++ +     +L  +++ Q   + + N+L+  ++ +       
Sbjct: 2   ISIRAKL----SLWLTGLVIVSTIIGLFLFESMLRQAFHDSIINRLEEDLEHVILATHMQ 57

Query: 72  PQGQLTLTTRLADPRFTQPYSGLYWSATLGDQTLRSRSLWDRFLT------EETHVHGTI 125
             G + + + +    +   YSG Y+   L D+ +RSRSLWD+ L        ET V    
Sbjct: 58  -DGDIGIDSSMLSGFYRPAYSGRYYQLNLPDEVIRSRSLWDQQLAITPLAPSETRVWQA- 115

Query: 126 YLGAKEESLIVLKRTVYLPEFSQPITITIGLDDAPLKATLQRVSKELWMILALLFSGILV 185
             G K   + +L   +         T+T+  D     +  +RV  E++    ++  G+L+
Sbjct: 116 -RGPKNHDMQLLSVGLKSQNGKIQATLTVAQD----LSIGRRVFSEIYGTKLMVNLGMLL 170

Query: 186 --LTGVQVTW--SLRPLSKMQRELSALRDGQQNALNGD-YPQEISPLVNDLNALLFHYQE 240
             +TG+ +    S +PL K++  LS LRDG  + L  D  P E+ PL    N LL +  +
Sbjct: 171 AMITGIFLVLRQSFKPLRKIKEALSRLRDGDIDRLALDSIPAELHPLAATYNELLEYTGK 230

Query: 241 LLERARHHAGNLSHALKTPLSVLKNEVTQ--LNDAQLRIQLQPSVEQIQQQIDYHLGRAR 298
            + R+R++ GNLSH LKTPL+V++ +V    L+D ++   +Q  ++ I++ I+  L  AR
Sbjct: 231 QIARSRNNLGNLSHGLKTPLAVMQQQVEALGLSDPEMADAMQQQLDLIRKMIERKLAAAR 290

Query: 299 MAGSANILSVKTAPSARVDAISQAFDKVYAERGITLVNELDSDL-EVAVEPTDLDEMIGN 357
           + G     +    P   +D+++   +KV+  + I    ++   L  + +   D  E+IGN
Sbjct: 291 VTGDMLPAAQMQIP-RDLDSLTNTLNKVHRHKDIHFSIDIARGLHRLPIHREDGMELIGN 349

Query: 358 LLENSYKWANSLIRVHSQILSDDWVQICVEDDGAGISATNREKALKRGVRLDETTPGTGL 417
           LL+N+ KWA   + +    L D+ + + +EDDG G++     +  +RG RLDE   G G+
Sbjct: 350 LLDNACKWAKGEVSLRLYPL-DNRLWLDIEDDGPGVADDALSQLTERGKRLDEAVMGHGI 408

Query: 418 GLNIVSEMAHSYRGALALGES-QLGGLKATL 447
           GL+IV E+   Y   L      +LGGLK ++
Sbjct: 409 GLSIVKEICEQYELKLDFSRGVRLGGLKVSI 439