Pairwise Alignments

Query, 462 a.a., ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 484 a.a., integral membrane sensor signal transduction histidine kinase (RefSeq) from Shewanella loihica PV-4

 Score =  152 bits (384), Expect = 2e-41
 Identities = 138/478 (28%), Positives = 223/478 (46%), Gaps = 53/478 (11%)

Query: 17  SLKTRLLLAAALWLGAMILAAGYLIPNLIHQYLLEDVQNQLQLSMDEITANLEANPQGQL 76
           SL+ RL+L+A L +  ++   G+ + N   Q ++ +V+ QL   +  + A  E + +G+L
Sbjct: 13  SLRVRLILSALLLILLLLPTIGFALNNAFKQQVMTNVREQLSAYLYSVLAVAEMD-EGKL 71

Query: 77  TLTTRLADPRFTQPYSGLYW-----------SATLGDQTLRSRS----LWDRFLTEETHV 121
            +   L + +F    SGLY            S   GD    S+S      DR  + E   
Sbjct: 72  YMPEALLENQFNVIGSGLYAVIDSAGAHGTDSVHQGDNQNDSQSDNQTESDRQASVEPLW 131

Query: 122 HGTIYLGAK----------------EESLIVLKRTVY----------LPEFSQPITITIG 155
               +LG                  E+ L      +Y              S PITI I 
Sbjct: 132 SSNSFLGLNITTPLPHPKVGRSEFGEQMLEQQPHLIYSFSVRFAPGEAQRQSAPITIHII 191

Query: 156 LDDAPLKATLQRVSKELWMILALLFSGILVLTGVQVTWSLRPLSKMQRELSALRDGQQNA 215
            D   +   L+  S+ LW  L +L   +L +    + W+L+PL++ + EL  ++ G+   
Sbjct: 192 KDLDGVAQQLKAFSQHLWSWLVVLMLVLLAIQFAWLAWTLKPLARFREELGQVQRGEAEQ 251

Query: 216 LNGDYPQEISPLVNDLNALLFHYQELLERARHHAGNLSHALKTPLSVLKNEVTQLNDAQL 275
           L+G YP E+  +   LN LL   Q    R R+   +L+H+LKTPL+V++++   L+   L
Sbjct: 252 LSGHYPNELQAVAKQLNTLLSTEQRQRSRYRNALSDLAHSLKTPLAVIQSQ-KDLSPTSL 310

Query: 276 RIQLQPSVEQIQQQIDYHLGRAR-MAGSANILSVKTAPSARVDAISQAFDKVYAERGITL 334
                  V QI + I + L RA+  AG+A  L +K   S   D + +   K++    ++ 
Sbjct: 311 E-----QVGQINRTIGHQLKRAQSAAGNAWHLGIKV--SLVSDKLLRTLVKIHPGVALSY 363

Query: 335 VNELDSDLEVAVEPTDLDEMIGNLLENSYKWANSLIRVHSQILSDDWVQICVEDDGAGIS 394
               + +     + +DL EM+GNLL+N+ K A + + + S    +  + I VEDDGAG+S
Sbjct: 364 GKAPEENQIFYGDQSDLTEMLGNLLDNACKAARNKVML-SVDADNGKLIISVEDDGAGVS 422

Query: 395 ATNREKALKRGVRLDETTPGTGLGLNIVSEMAHSYRGALALGES-QLGGLKATLTLKQ 451
              R+  L+RG R D    G G+GL IV ++  SY+G L +  S  LGG K  L+  Q
Sbjct: 423 PEQRQLILERGRRADTYEKGHGIGLAIVGDLVQSYQGELTIDSSATLGGAKFILSFPQ 480