Pairwise Alignments

Query, 462 a.a., ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 445 a.a., integral membrane sensor signal transduction histidine kinase (RefSeq) from Shewanella loihica PV-4

 Score =  193 bits (491), Expect = 8e-54
 Identities = 141/453 (31%), Positives = 239/453 (52%), Gaps = 30/453 (6%)

Query: 16  LSLKTRLLLAAALWLGAMILAAGY----LIPNLIHQYLLEDVQNQLQLSMDEITANLEAN 71
           +S++T+L    +LWL A+++ + +    +  +++ Q   + + ++L+  ++++   ++ +
Sbjct: 2   ISIRTKL----SLWLSALVIISTFVAIVIFESMLRQAFHDSIIDRLEEDLEQVLLAIQFD 57

Query: 72  PQGQLTLTTRLADPRFTQPYSGLYWSATLGDQTLRSRSLWDRFLTEETHVHGTIYL---- 127
             G +++        +   YSG Y+   L D  LRSRSLWD+ L  E    G   +    
Sbjct: 58  -NGDISIDPNQVSNFYKPVYSGRYYQLNLKDIELRSRSLWDQRLEIEPLSKGQTRVWQTK 116

Query: 128 GAKEESLIVLKRTVYLPEFSQPITITIGLDDAPLKATLQRV-----SKELWMILALLFSG 182
           G +   + +L   +   +     T+T+  D +  +    +V     S  L M+L ++ +G
Sbjct: 117 GPQNHDIQLLSLGLSSADAKVQATLTVAQDLSIGRQVFSQVYGTKLSVNLAMLLTMV-AG 175

Query: 183 ILVLTGVQVTWSLRPLSKMQRELSALRDGQQNALN-GDYPQEISPLVNDLNALLFHYQEL 241
           I +L    +  S +P++ MQR L  LR+G+  AL+    P E++PL    N LL +  + 
Sbjct: 176 IFIL----LRQSFKPINDMQRALMKLREGEITALDTSKIPPELAPLAQTYNELLQYSSKQ 231

Query: 242 LERARHHAGNLSHALKTPLSVLKN--EVTQLNDAQLRIQLQPSVEQIQQQIDYHLGRARM 299
           +ER+R++ GNLSH LKTPL+V++   EV  L D +    +Q  ++QI + I+  L  AR+
Sbjct: 232 MERSRNNLGNLSHGLKTPLAVMQQQVEVLGLKDPEAASAMQSQLDQIHKMIERKLAAARI 291

Query: 300 AGSANILSVKTAPSARVDAISQAFDKVYAERGITLVNELDSDL-EVAVEPTDLDEMIGNL 358
            G     +    P    D ++Q   KV+  + I     LD  L  + +   D  E+IGNL
Sbjct: 292 TGDMLPAAQMQLPKDLQD-LAQTLTKVHGHKAIACEFSLDERLSRLPIHREDGMELIGNL 350

Query: 359 LENSYKWANSLIRVHSQILSDDWVQICVEDDGAGISATNREKALKRGVRLDETTPGTGLG 418
           L+N++KWA+S + V S   +D+ + + +EDDG G++        +RG RLDE   G GLG
Sbjct: 351 LDNAFKWADSKVAV-STAQTDEQILLTIEDDGPGVADEALSLLTQRGKRLDEAIMGHGLG 409

Query: 419 LNIVSEMAHSYRGALALGES-QLGGLKATLTLK 450
           L+IV ++A  Y  +LA   S QLGGLK TL LK
Sbjct: 410 LSIVKDIAEQYEISLAFEHSQQLGGLKITLGLK 442