Pairwise Alignments

Query, 462 a.a., ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 454 a.a., sensor histidine kinase (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  164 bits (416), Expect = 4e-45
 Identities = 124/448 (27%), Positives = 224/448 (50%), Gaps = 27/448 (6%)

Query: 17  SLKTRLLLAAALWLGAMILAAGYLIPNLIHQYLLEDVQNQLQLSMDEITANLEANPQGQL 76
           SLKTRL+L+A L++  ++   G  + +   + +    +N+L   +  I A  E   + ++
Sbjct: 13  SLKTRLVLSALLFILVLLPLIGVALNDAFAEQVKSAAKNELSAYVYSILAVTEVENK-RI 71

Query: 77  TLTTRLADPRFTQPYSGLYWSATLGDQTLRSRSLWD-----------RFLTEETHVHGTI 125
            +   + + RF    SGLY  AT  +   +   +W            +F    T  +   
Sbjct: 72  FIPELVLENRFNLIQSGLYAIATTENAEHKQSIVWHSQSFMGITPPAQFTIPPTGKNAFE 131

Query: 126 YLGAKEESLIVLKRTVYLPEFSQ--PITITIGLDDAPLKATLQRVSKELWMILALLFSGI 183
            +       ++   +V     ++  P+TI I  D+   +  + + +++LW  L +L   +
Sbjct: 132 QIDLAGAPHLIYSFSVSFASLNENVPVTIHIIKDEQEFQQQIAQFNQQLWTWLLILILVM 191

Query: 184 LVLTGVQVTWSLRPLSKMQRELSALRDGQQNALNGDYPQEISPLVNDLNALLFHYQELLE 243
           +V     + W++RPL++  +EL  +  G+   L+  YP E+  +   LN LL   Q   +
Sbjct: 192 MVFQLSWLIWTIRPLARFTQELHDVEQGKSTQLSSQYPSELQAVARQLNILLNTEQTQRK 251

Query: 244 RARHHAGNLSHALKTPLSVLKNEVTQLNDAQLRIQLQPSVEQIQQQIDYHLGRARMAGSA 303
           R R+   +L+H+LKTPL+V+K++V  L++A         V  I + I + L RA+ A +A
Sbjct: 252 RYRNALADLAHSLKTPLAVIKSQV-DLSEAS-----SEQVSNISRIISHQLKRAQTAAAA 305

Query: 304 N-ILSVKTAPSARVDAISQAFDKVYAERGITLVNELDSDLEVAVEPTDLDEMIGNLLENS 362
           +  L +K    A  + + +   K+Y E  I L  E+        +  DL E++GNLL+N+
Sbjct: 306 SWHLGIKVDEVA--NKLLRTLAKIYREPQINLSGEIADLAVFKGDEADLTEILGNLLDNA 363

Query: 363 YKWANSLIRVHSQILSDDW-VQICVEDDGAGISATNREKALKRGVRLDETTPGTGLGLNI 421
            K A S +++   +  D + +Q+C+EDDG GIS   + +  +RG+R D    G G+GL I
Sbjct: 364 CKAAKSTVKL--TVTGDAYQLQLCIEDDGPGISDALQTQIFERGIRADSYHQGNGIGLAI 421

Query: 422 VSEMAHSYRGALALGESQ-LGGLKATLT 448
           V ++  SY G +++  S+ LGG K T++
Sbjct: 422 VRDLVDSYNGRISVSRSESLGGAKFTVS 449