Pairwise Alignments

Query, 219 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 225 a.a., Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain from Pseudomonas stutzeri RCH2

 Score =  173 bits (439), Expect = 2e-48
 Identities = 89/218 (40%), Positives = 138/218 (63%), Gaps = 4/218 (1%)

Query: 1   MKILVVEDDVQLGQQILSALEQTGWVPELAQDGIDALYRATAEEWDVIVLDLGLPKLDGL 60
           MK+LVVED+  L   +L+ L ++G + +   +  +ALY+      D+ V+DLGLP + GL
Sbjct: 1   MKVLVVEDEALLRHHLLTRLGESGHIVDAVPNAEEALYQTHEFNHDLAVIDLGLPGISGL 60

Query: 61  TVLKGIRDENINTPVVILSARDTLTQRVEGLNAGADDYLTKPFEMVELIARIRAQLRRAS 120
            +++ +R      P++IL+AR     +VEGL AGADDY+ KPF+  EL AR+ A LRR+S
Sbjct: 61  DLIRQLRSRGKVFPILILTARGNWQDKVEGLAAGADDYVVKPFQFEELEARLNALLRRSS 120

Query: 121 GNASPVMQVGDLSLDTRTSKVMWQGQAVSLTALEYKVIAYFMHNPEKVISRTELVEHIYK 180
           G     ++ G L LD    + M  G+ ++LTA EY+++ Y M + ++V+++  L+E +Y 
Sbjct: 121 GFTQATIEAGPLLLDLNRKQAMANGEPLALTAYEYRILEYLMRHQQQVVAKERLMEQLYS 180

Query: 181 QDFDRDSNTIEVFIGRIRKKI----APDVIKTVRGLGY 214
            D +RD N IEV +GR+R+K+    A   I+TVRGLGY
Sbjct: 181 GDEERDPNVIEVLVGRLRRKLEAQCAMKPIETVRGLGY 218