Pairwise Alignments

Query, 219 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 219 a.a., Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain from Pseudomonas stutzeri RCH2

 Score =  176 bits (446), Expect = 3e-49
 Identities = 91/214 (42%), Positives = 139/214 (64%)

Query: 1   MKILVVEDDVQLGQQILSALEQTGWVPELAQDGIDALYRATAEEWDVIVLDLGLPKLDGL 60
           M+IL+VEDD  LG+ I +AL+  G+  +  QDG  AL+  + E +++ +LDLGLP+LDGL
Sbjct: 1   MRILLVEDDRALGEGIRTALKPEGYTVDWLQDGASALHALSHESFELAILDLGLPRLDGL 60

Query: 61  TVLKGIRDENINTPVVILSARDTLTQRVEGLNAGADDYLTKPFEMVELIARIRAQLRRAS 120
            VLK +R      PV++L+ARD    R+ GL+AGADDYL KPF++ EL AR+RA LRR+ 
Sbjct: 61  EVLKRLRAAANPVPVLVLTARDATGDRIAGLDAGADDYLVKPFDVAELKARLRALLRRSF 120

Query: 121 GNASPVMQVGDLSLDTRTSKVMWQGQAVSLTALEYKVIAYFMHNPEKVISRTELVEHIYK 180
               P ++   + LD    +V +QG  ++L   E+ ++   +  P +V++R  L + +Y 
Sbjct: 121 NRPEPSLEYRGILLDPVNQQVSYQGTPINLPRKEFVLLHELLAQPGRVLTRDRLQQVLYG 180

Query: 181 QDFDRDSNTIEVFIGRIRKKIAPDVIKTVRGLGY 214
            D + +SN +EV I  +RKK  P++I+TVRG+GY
Sbjct: 181 WDEEVESNALEVHIHHLRKKFFPELIRTVRGVGY 214