Pairwise Alignments

Query, 219 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 223 a.a., Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain from Pseudomonas stutzeri RCH2

 Score =  164 bits (414), Expect = 2e-45
 Identities = 89/220 (40%), Positives = 131/220 (59%), Gaps = 2/220 (0%)

Query: 1   MKILVVEDDVQLGQQILSALEQTGWVPELAQDGIDALYRATAEEWDVIVLDLGLPKLDGL 60
           M+IL+VED  QL + +  AL   GW  +L QDGI A     +E++ + +LD+GLP+LDG 
Sbjct: 1   MRILLVEDHPQLAESVAQALRAAGWTVDLLQDGIAADLALASEDYALAILDVGLPRLDGF 60

Query: 61  TVLKGIRDENINTPVVILSARDTLTQRVEGLNAGADDYLTKPFEMVELIARIRAQLRRAS 120
            VL  +R+     PV++L+AR  ++ RV GLN GADDYL KPFE+ EL AR++A LRR+ 
Sbjct: 61  QVLARLRERGKTLPVLMLTARGEVSDRVHGLNLGADDYLAKPFELSELEARVKALLRRSV 120

Query: 121 GNASPVMQVGDLSLDTRTSKVMWQGQAVSLTALEYKVIAYFMHNPEKVISRTELVEHIYK 180
           G      + G L  D    +     + ++LT+ E  V+   +  P +V+S+ +L   ++ 
Sbjct: 121 GGGERQQRCGALVYDLDARRFSLAEEPLTLTSREQGVLEALIARPGRVMSKDQLAAQVFG 180

Query: 181 QDFDRDSNTIEVFIGRIRKKI--APDVIKTVRGLGYQLHA 218
            D D  +  IE++I R+RKK+   P  I T RGLGY L A
Sbjct: 181 LDEDASAEAIEIYIHRLRKKLEGQPVRIVTFRGLGYMLEA 220