Pairwise Alignments

Query, 219 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 227 a.a., Two component Transcriptional regulator, Winged helix family (NCBI) from Rhodospirillum rubrum S1H

 Score =  164 bits (415), Expect = 1e-45
 Identities = 83/225 (36%), Positives = 138/225 (61%), Gaps = 6/225 (2%)

Query: 1   MKILVVEDDVQLGQQILSALEQTGWVPELAQDGIDALYRATAEEWDVIVLDLGLPKLDGL 60
           M+ILV+EDD ++   +L  L + G V +   DG D L++A  E +D++++D  LP +DGL
Sbjct: 1   MRILVIEDDKEVAAHLLKGLREAGHVADSVADGRDGLFQAAGEAYDLLIVDRMLPNVDGL 60

Query: 61  TVLKGIRDENINTPVVILSARDTLTQRVEGLNAGADDYLTKPFEMVELIARIRAQLRRAS 120
           T+++ +R      PV+ILSA   +  RV+GL AG DDYL KPF   EL+ARI A  RR +
Sbjct: 61  TIVRTLRASGKTVPVLILSALGEVDDRVKGLRAGGDDYLVKPFAFAELLARIDALTRRTA 120

Query: 121 GNASPV--MQVGDLSLDTRTSKVMWQGQAVSLTALEYKVIAYFMHNPEKVISRTELVEHI 178
           G+ +    ++ G++ +D    +V    + + L   E++++ Y M + ++V++RT L+E++
Sbjct: 121 GSDAEQTRLRAGEVEMDLLARRVTRGSRTIDLQPREFRLLEYLMRHADQVVTRTMLLENV 180

Query: 179 YKQDFDRDSNTIEVFIGRIRKKI----APDVIKTVRGLGYQLHAN 219
           +   FD  +N ++V I R+R+K+    A   ++TVRG GY L  N
Sbjct: 181 WDYHFDPQTNVVDVHISRLRRKMDEGFAQPFLETVRGAGYVLRTN 225