Pairwise Alignments

Query, 219 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 226 a.a., two component transcriptional regulator (RefSeq) from Shewanella loihica PV-4

 Score =  205 bits (522), Expect = 5e-58
 Identities = 103/220 (46%), Positives = 156/220 (70%), Gaps = 4/220 (1%)

Query: 1   MKILVVEDDVQLGQQILSALEQTGWVPELAQDGIDALYRATAEEWDVIVLDLGLPKLDGL 60
           M++L+VEDD+ L + +   L    +  ++A DG + L++     +D  ++D+GLPKLDG+
Sbjct: 1   MRLLLVEDDLALQENLRQHLLDANYTLDIASDGEEGLFQGREYPYDAAIIDVGLPKLDGI 60

Query: 61  TVLKGIRDENINTPVVILSARDTLTQRVEGLNAGADDYLTKPFEMVELIARIRAQLRRAS 120
            ++  +R+E I+ P++IL+ARD    +VEGL+AGADDYLTKPF   EL+AR++A +RRA+
Sbjct: 61  ALIARLREEGIDYPILILTARDNWQDKVEGLDAGADDYLTKPFHPEELVARLKALIRRAA 120

Query: 121 GNASPVMQVGDLSLDTRTSKVMWQGQAVSLTALEYKVIAYFMHNPEKVISRTELVEHIYK 180
           G +SPV+Q G  SL+T + ++ +  Q VSL+  EYK+  YFM +  +V S++ L+EHIY 
Sbjct: 121 GKSSPVIQNGPYSLNTSSHEIKFGDQDVSLSGSEYKLFEYFMLHIGEVKSKSILIEHIYD 180

Query: 181 QDFDRDSNTIEVFIGRIRKKIAPD----VIKTVRGLGYQL 216
           QDFD DSN IEVFI R+RKK+ P+    +I+T+RG GY+L
Sbjct: 181 QDFDLDSNVIEVFIRRLRKKLDPNGQYGLIETLRGQGYRL 220