Pairwise Alignments

Query, 219 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 225 a.a., two component transcriptional regulator (RefSeq) from Shewanella loihica PV-4

 Score =  159 bits (403), Expect = 3e-44
 Identities = 89/223 (39%), Positives = 136/223 (60%), Gaps = 9/223 (4%)

Query: 1   MKILVVEDDVQLGQQILSALEQTGWVPELAQDGIDALYRATAEEWDVIVLDLGLPKLDGL 60
           MKIL+VEDD    + ++    + G   E A DG   L  AT+ ++D+++LD  LP+LDGL
Sbjct: 1   MKILLVEDDATTTEYVVKGFAEQGHNIETASDGHQGLLLATSMQYDLVILDRMLPQLDGL 60

Query: 61  TVLKGIRDENINTPVVILSARDTLTQRVEGLNAGADDYLTKPFEMVELIARIRAQLRRAS 120
            +L  +R     TPV+ILSA   + +RV+GL AG DDY+TKPF   EL+ R    ++R  
Sbjct: 61  KLLAALRATGNQTPVLILSALSHVDERVKGLRAGGDDYMTKPFAFSELLVRAEKLMQR-- 118

Query: 121 GNASPV---MQVGDLSLDTRTSKVMWQGQAVSLTALEYKVIAYFMHNPEKVISRTELVEH 177
           GN++P    ++VG+L ++  T KV   G  + L   E++++ Y M +P +VISRT L E 
Sbjct: 119 GNSAPAQTELKVGELVMELLTRKVTLAGSEILLQPKEFQLLKYLMEHPNQVISRTLLFEA 178

Query: 178 IYKQDFDRDSNTIEVFIGRIRKKIAP----DVIKTVRGLGYQL 216
           ++   FD  +N I+V I ++R+K       ++I+TVRG GY+L
Sbjct: 179 VWDYHFDPRTNVIDVHIAKLRRKFEELGFGELIETVRGAGYRL 221