Pairwise Alignments

Query, 219 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 220 a.a., DNA-binding response regulator (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  190 bits (482), Expect = 2e-53
 Identities = 93/217 (42%), Positives = 147/217 (67%), Gaps = 1/217 (0%)

Query: 1   MKILVVEDDVQLGQQILSALEQTGWVPELAQDGIDALYRATAEEWDVIVLDLGLPKLDGL 60
           M++L++EDD+ L  +++ AL + G+  E A +GID  +    E ++ ++LDLGLP   GL
Sbjct: 1   MRLLLIEDDIDLVARLIPALNKAGYTVEHADNGIDGAFLGEEEAFEAVILDLGLPGKPGL 60

Query: 61  TVLKGIRDENINTPVVILSARDTLTQRVEGLNAGADDYLTKPFEMVELIARIRAQLRRAS 120
           +VL   R + +  PV+IL+ARD   +RV+GL AGADDYL KPF + EL+AR+ A +RR  
Sbjct: 61  SVLSHWRQKGLAMPVLILTARDAWHERVDGLKAGADDYLGKPFHVEELLARLEALIRRHF 120

Query: 121 GNASPVMQVGDLSLDT-RTSKVMWQGQAVSLTALEYKVIAYFMHNPEKVISRTELVEHIY 179
           G A  ++Q   +SLD  + +    +G+ + LT +EY+++ Y M NP K++S++EL E IY
Sbjct: 121 GRADNLLQHAGVSLDVDKQTATNAEGEVIELTKIEYRLLHYLMANPSKIVSKSELSERIY 180

Query: 180 KQDFDRDSNTIEVFIGRIRKKIAPDVIKTVRGLGYQL 216
           ++D  +DSN IEV++ R+R+++  D I+T RG GY+L
Sbjct: 181 EEDQIKDSNVIEVYVNRLRQRLGKDYIETRRGQGYRL 217