Pairwise Alignments

Query, 219 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 227 a.a., two component transcriptional regulator (RefSeq) from Shewanella sp. ANA-3

 Score =  192 bits (489), Expect = 3e-54
 Identities = 100/220 (45%), Positives = 151/220 (68%), Gaps = 4/220 (1%)

Query: 1   MKILVVEDDVQLGQQILSALEQTGWVPELAQDGIDALYRATAEEWDVIVLDLGLPKLDGL 60
           M++L+VEDD+ L   +   L    +  ++A DG + L++A    +D  ++D+GLPKLDG+
Sbjct: 1   MRLLLVEDDLALQANLKQHLLDAHYSIDVASDGEEGLFQAIEYNYDAAIIDVGLPKLDGI 60

Query: 61  TVLKGIRDENINTPVVILSARDTLTQRVEGLNAGADDYLTKPFEMVELIARIRAQLRRAS 120
           ++++ +R +    P++IL+ARD+   +VEGL+AGADDYLTKPF   EL+AR++A +RR++
Sbjct: 61  SLIRRVRQKERAFPILILTARDSWQDKVEGLDAGADDYLTKPFHPEELVARLKALIRRSA 120

Query: 121 GNASPVMQVGDLSLDTRTSKVMWQGQAVSLTALEYKVIAYFMHNPEKVISRTELVEHIYK 180
           G ASPV+  G  SL+T + +V    + V+L+  EYK+   FM +  +V S+T L EHIY 
Sbjct: 121 GKASPVITNGPFSLNTSSLEVRKGDELVTLSGSEYKLFEIFMLHQGEVKSKTALTEHIYD 180

Query: 181 QDFDRDSNTIEVFIGRIRKKIAPD----VIKTVRGLGYQL 216
           QDFD DSN IEVFI R+ KK+ PD    +I+T+RG GY+L
Sbjct: 181 QDFDLDSNVIEVFIRRLCKKLDPDNQYNLIETLRGQGYRL 220