Pairwise Alignments

Query, 219 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 227 a.a., two component transcriptional regulator (RefSeq) from Shewanella sp. ANA-3

 Score =  166 bits (420), Expect = 3e-46
 Identities = 88/221 (39%), Positives = 138/221 (62%), Gaps = 5/221 (2%)

Query: 1   MKILVVEDDVQLGQQILSALEQTGWVPELAQDGIDALYRATAEEWDVIVLDLGLPKLDGL 60
           M+ILVVEDD+ L   +   L   G   ++A    +  ++AT    DV ++DLGLP  DG+
Sbjct: 4   MRILVVEDDLILSHHLKVQLSDLGNQVQVALTAKEGFFQATNYPIDVAIVDLGLPDQDGI 63

Query: 61  TVLKGIRDENINTPVVILSARDTLTQRVEGLNAGADDYLTKPFEMVELIARIRAQLRRAS 120
           ++++ +R+E +  P++IL+AR     +VEGLNAGADDYL KPF+  EL+AR+ A +RR++
Sbjct: 64  SLIQQLREEGVKAPILILTARVNWQDKVEGLNAGADDYLVKPFQKEELVARLDALVRRSA 123

Query: 121 GNASPVMQVGDLSLDTRTSKVMWQGQAVSLTALEYKVIAYFMHNPEKVISRTELVEHIYK 180
           G   PV+  G+L LD    +V    + + +TA EY ++ Y M +  +V+++  L++ IY 
Sbjct: 124 GFVKPVITSGELKLDLAAKQVTLANEVMEVTAFEYLILEYLMRHCHEVVAKQRLLDVIY- 182

Query: 181 QDFDRDSNTIEVFIGRIRKKIAPD----VIKTVRGLGYQLH 217
            D + D NTIEV + R+RKK+  D     I T+RG GY+ +
Sbjct: 183 GDKEGDPNTIEVMVSRLRKKLTRDGIDNPIVTIRGQGYKFN 223