Pairwise Alignments

Query, 219 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 224 a.a., two component transcriptional regulator (RefSeq) from Shewanella sp. ANA-3

 Score =  172 bits (435), Expect = 6e-48
 Identities = 85/220 (38%), Positives = 142/220 (64%), Gaps = 3/220 (1%)

Query: 1   MKILVVEDDVQLGQQILSALEQTGWVPELAQDGIDALYRATAEEWDVIVLDLGLPKLDGL 60
           MK+L+VED+  L  ++   L+Q G+V ++    ++A Y     ++D ++LD+GLP  +GL
Sbjct: 1   MKLLLVEDNPMLVSELEKQLKQAGYVTDITDKALEADYLVKETQYDCVILDIGLPDGNGL 60

Query: 61  TVLKGIRDENINTPVVILSARDTLTQRVEGLNAGADDYLTKPFEMVELIARIRAQLRRAS 120
            +L+G R++ I+TPV++L+AR    ++VEG NAGADDYL KPF   EL+ARI+A + RA 
Sbjct: 61  ELLEGWRNQGISTPVIMLTARSQWHEKVEGFNAGADDYLGKPFHAQELLARIQALIHRAH 120

Query: 121 G---NASPVMQVGDLSLDTRTSKVMWQGQAVSLTALEYKVIAYFMHNPEKVISRTELVEH 177
           G   N S  +  G ++LD     V        LTA+E++++  F+ +P+K++S+ +L + 
Sbjct: 121 GRLNNPSKQLSYGGVTLDEAEQTVSVGEHLYELTAMEFRLLKIFLMSPKKLLSKAQLTDK 180

Query: 178 IYKQDFDRDSNTIEVFIGRIRKKIAPDVIKTVRGLGYQLH 217
           +Y+ D +++SN +EV++  +RKK+    I+T RG GY  H
Sbjct: 181 LYQFDDEKESNVVEVYVTHLRKKLGKTAIETRRGQGYIFH 220