Pairwise Alignments

Query, 594 a.a., ATP-dependent helicase from Vibrio cholerae E7946 ATCC 55056

Subject, 469 a.a., DEAD/DEAH box helicase-like from Synechococcus elongatus PCC 7942

 Score =  125 bits (313), Expect = 5e-33
 Identities = 111/365 (30%), Positives = 174/365 (47%), Gaps = 36/365 (9%)

Query: 2   YTLRPYQADSVKAVVHYFRQHSTPAVIVLPTGAGKSLVIAELARLARG---RVLVLAHVK 58
           + LR YQ   V+ + H +       ++ +PTGAGK+ V + ++  +     R L+L H K
Sbjct: 4   FELRDYQQQVVEELRHSYATGHRSPLVAMPTGAGKTAVFSYISLQSAAKQKRTLILVHRK 63

Query: 59  ELVEQNHAKYEGYGLTGAIFSAGLGRKETDQQVVFASVQSVVRNLSEFQNQFSLLVIDEC 118
           EL+ Q     +  G+   + ++G        QV  ASVQ++VR L     +  L+V+DE 
Sbjct: 64  ELLLQASRSLDRLGVRHGLIASGFSWMPYPTQV--ASVQTLVRRLDRLDWEPELIVVDEA 121

Query: 119 HRVPDDKNSSYQKVITHLLELNPGMKVLGLTATPYRLGMGWIYQYHTRGLVRSEEPRFFR 178
           H V  D  +++ KV    L   P  +VLG+TATP R           RGL        F 
Sbjct: 122 HHVVPD--NTWGKV----LSAYPRSRVLGVTATPCRTD--------GRGL-----GDVFD 162

Query: 179 DCIFELPIHYLLDEGFLTPAQLIDTPVMSYDFSQLKPANTGRYRESELDLVIEQSQRATP 238
           D I    I  L + GFL P ++   P+ + D + ++    G Y + +L   +++     P
Sbjct: 163 DLIIGPTIAELTERGFLCPTKIYAPPIQA-DLTGVR-MRAGDYAKDQLAQAMDK-----P 215

Query: 239 QIVAQIIE-LAKARQGVMI--FAATVRHAEEIYRLLPTE--HAALVIGDTPTPERDRIIQ 293
            IV   I+   +   GV    F A+V  A+++     +    AA + G   +  R  +I 
Sbjct: 216 VIVGDAIDHYRRLCPGVPAIGFCASVEIAQKVAVEFSSAGFKAASLDGTLDSATRSHLID 275

Query: 294 AFKQQQIKFLVNVSVLTTGFDAPHVDLIAILRPTESVSLYQQIVGRGLRLAAGKSDCLVL 353
                +I+ L +  +++ G D P V    +LRPT+S+ LY Q VGR LR A GKS  L+L
Sbjct: 276 DLGSGRIQVLTSCEIVSEGTDIPVVTAALLLRPTQSLGLYLQQVGRVLRPAPGKSHALIL 335

Query: 354 DYAGN 358
           D+ GN
Sbjct: 336 DHVGN 340