Pairwise Alignments

Query, 594 a.a., ATP-dependent helicase from Vibrio cholerae E7946 ATCC 55056

Subject, 672 a.a., excinuclease ABC subunit B (RefSeq) from Shewanella amazonensis SB2B

 Score = 47.8 bits (112), Expect = 1e-09
 Identities = 50/190 (26%), Positives = 77/190 (40%), Gaps = 32/190 (16%)

Query: 189 LLDEGFLTPAQLIDTPVMSYDFSQLKP------ANTGRYR-ESELDLVIEQSQRAT---- 237
           L++ GF  P+ L + P+   +F  L P      A  G+Y  E   D + EQ  R T    
Sbjct: 362 LVEYGFRLPSALDNRPLKFEEFESLMPQTIFVSATPGKYELEKSGDDIAEQVVRPTGLID 421

Query: 238 ------------PQIVAQIIELAKARQGVMIFAATVRHAEEIYRLLPTEHAALVI---GD 282
                         +++++ +     + V++   T R AE++   L  EH   V     D
Sbjct: 422 PELEVRPVAIQVDDLLSEVAKRVAVNERVLVTTLTKRMAEDLTDYLD-EHGVKVRYLHSD 480

Query: 283 TPTPERDRIIQAFKQQQIKFLVNVSVLTTGFDAPHVDLIAILRPTESVSLYQ-----QIV 337
             T ER  II+  +      LV +++L  G D P V L+ IL   +   L       Q +
Sbjct: 481 IDTVERMEIIRDLRLGVFDVLVGINLLREGLDMPEVSLVCILDADKEGFLRSERSLIQTI 540

Query: 338 GRGLRLAAGK 347
           GR  R   GK
Sbjct: 541 GRAARNVNGK 550