Pairwise Alignments

Query, 594 a.a., ATP-dependent helicase from Vibrio cholerae E7946 ATCC 55056

Subject, 1113 a.a., DEAD/DEAH box helicase family protein from Rhodopseudomonas palustris CGA009

 Score = 67.0 bits (162), Expect = 4e-15
 Identities = 89/385 (23%), Positives = 150/385 (38%), Gaps = 71/385 (18%)

Query: 4   LRPYQADSVKAVVHYFRQHSTPAVIVLPTGAGKSLVIAEL-ARLARGRVLVLAHVKELVE 62
           LR  Q  ++ A + +  + + PA IV+PTG GK+  +  L AR    R+LV+     L E
Sbjct: 162 LRRPQIGALHAALAHATRSTDPATIVMPTGTGKTETMLALNARQGFDRLLVVVPTDALRE 221

Query: 63  QNHAKYEGYGL--------TGAIFSA-------GLGRKETDQQVVFASVQSVVRNL---- 103
           Q  AK+E +G+          A+F              E DQ  +F S   +V  +    
Sbjct: 222 QIAAKFETFGVLKAQSCLDVSALFPVVTRLTRIPTSIAEVDQ--IFDSANVIVTTMHIAG 279

Query: 104 -------SEFQNQFSLLVIDECHRVPDDKNSSYQKVITHLLELNPGMKVLGLTATPYRLG 156
                       + S L IDE H +     +S++ +     E  P + V+  TATP+R  
Sbjct: 280 RAEPPVQEHMATRASALFIDEAHHIGARTWASFRGLFA---ERTPPIPVVQFTATPFR-- 334

Query: 157 MGWIYQYHTRGLVRSEEPRFFRDCIFELPIHYLLDEGFLTPAQLIDTPVMSYDFSQLKPA 216
                          +  R   + I+  P+     EG+  P +        +   QL   
Sbjct: 335 --------------EDGRRVDGEFIYTYPLKKAQQEGYFKPIRFEAV----FGLDQL--- 373

Query: 217 NTGRYRESELDLVIEQSQRATPQIVAQIIELAKARQGVMIFAATVRHAEEIYRLL----P 272
                 +++  ++ +        + A +  LA AR       +T+  A+ ++RL     P
Sbjct: 374 ------DADQAIIDKLGDVLAADLDAGLNHLAMAR------CSTIERAKHLHRLYTLAYP 421

Query: 273 TEHAALVIGDTPTPERDRIIQAFKQQQIKFLVNVSVLTTGFDAPHVDLIAILRPTESVSL 332
                +V       ER   + A ++   + +V V +L  GFD P + + A+    +SV++
Sbjct: 422 DYRPVIVHSQQSLKERRENLAALRRFDSRIIVCVDMLGEGFDLPELKIAALHDHHKSVAV 481

Query: 333 YQQIVGRGLRLAAGKSDCLVLDYAG 357
             Q VGR  R      D  V+   G
Sbjct: 482 TIQFVGRFTRQDPRLGDATVIANTG 506