Pairwise Alignments

Query, 594 a.a., ATP-dependent helicase from Vibrio cholerae E7946 ATCC 55056

Subject, 753 a.a., Helicase associated domain protein from Parabacteroides merdae CL09T00C40

 Score = 63.5 bits (153), Expect = 3e-14
 Identities = 93/395 (23%), Positives = 171/395 (43%), Gaps = 67/395 (16%)

Query: 4   LRPYQADSVKAVVHYFRQHSTPAVIVLPTGAGKSLVIAE-LARLARGRVLVLAHVKELVE 62
           L P+   + +A++  F+QH   AV V  TG GKS ++A  +A  A+ ++LV A    +++
Sbjct: 108 LYPHNEAAYRAIMRGFKQHRIGAV-VQATGTGKSYLLARYIADHAKEKILVFAPNITILD 166

Query: 63  QNHAKYEGYGLTGAIFSAGLGRKETDQQVVFASVQSVVRNLSE-FQNQFSLLVIDECHRV 121
           +   K  G+ +                QV + + QS++RN  +    +   ++IDE H  
Sbjct: 167 EIR-KAVGFSI---------------PQVTYRTFQSLIRNREDNGLLRADHILIDEFHHF 210

Query: 122 PDDKNSSYQKVITHLLELNPGMKVLGLTATPYRLGMGWIYQYHTRGLVRSEEPRFFRDCI 181
             +    +   +  ++E NP   VLG +ATP R            G++ + +  F  +  
Sbjct: 211 GAE---IWGSALQDVIENNPCAYVLGTSATPIR----------PEGMIDTVDLYFEGNLF 257

Query: 182 FELPIHYLLDEGFLTPAQLIDTPV---MSYDFSQLKPANTGRYR------ESELDLVIEQ 232
           +EL +        L    L+ +        D  Q K   +G  +      + +LDL    
Sbjct: 258 YELTLPQAWYYNILPVPVLVQSAYGLDNELDRLQRKLERSGCSKGRKEKVQKKLDLARVD 317

Query: 233 SQRA--TPQIVAQIIELAKARQGVMIFAATVRHAEEIYRLLPTEHAALV-IGDTPTP--- 286
            + A   P+++ + +  +  +  +++F    R   ++ +++P     L   G   TP   
Sbjct: 318 FKEALGAPEVIRKFLPTSVRK--LLVFC---RDLTDLKQMVPEVCGWLTRAGRAITPFEI 372

Query: 287 -------ERDRIIQAFKQQ--QIKFLVNVSVLTTGFDAPHVDLIAILRPTESVSLYQQIV 337
                  +  RI+ AF+++  ++  L +V++L  G     VD +  LR TES  +  Q +
Sbjct: 373 HHAQGERQNGRILDAFREESDRLHVLFSVNMLIEGLHVEGVDAVLFLRRTESYIVTLQQL 432

Query: 338 GRGLRLAAGKSDCLVLDYAGN-----QYDLYQPEV 367
           GR L   AGK   +VLD+  N      YD+  P +
Sbjct: 433 GRCLNAEAGKRP-VVLDFVNNLSGKSVYDVMAPHL 466