Pairwise Alignments

Query, 594 a.a., ATP-dependent helicase from Vibrio cholerae E7946 ATCC 55056

Subject, 691 a.a., ATP-dependent DNA helicase RecG (RefSeq) from Shewanella loihica PV-4

 Score = 55.1 bits (131), Expect = 1e-11
 Identities = 90/357 (25%), Positives = 145/357 (40%), Gaps = 68/357 (19%)

Query: 20  RQHSTPAVIVLPTGAGKSLV--IAELARLARGRVLVLAHVKELVEQNHAK-----YEGYG 72
           + H    ++    G+GK+LV  +A L  +  G  + +    EL+ + HA      +E  G
Sbjct: 284 KAHPMMRLVQGDVGSGKTLVAALAALQAIESGYQVAMMAPTELLAEQHANNFAAWFEHLG 343

Query: 73  LTGAIFSA---GLGRKETDQQVVFASVQSVVRNLSEFQ-----NQFSLLVIDECHRVPDD 124
           LT    +    G  R ++ QQ+       V+   + FQ     N+ +L++IDE HR    
Sbjct: 344 LTVGWLAGKLKGKARAQSLQQIKSGEAHIVIGTHAIFQEQVEFNRLALIIIDEQHRF--- 400

Query: 125 KNSSYQKVITHLLELNPGMKVLGLTATPYRLGMGWIYQYHTRGLVRSEEPRFFRDCIFEL 184
               +Q+              LGL     R G      +H   L+ +  P         +
Sbjct: 401 --GVHQR--------------LGLREKGIRQG------FHPHQLIMTATP---------I 429

Query: 185 PIHYLLDEGFLTPAQLIDTPVMSYDFSQLKPANTGRYRESELDLVIEQSQRATPQI---- 240
           P    +     T    +DT ++        P  T    ++    VI++ ++A  Q     
Sbjct: 430 PRTLAM-----TAYADLDTSIIDELPPGRTPVTTVAISDNRRGEVIDRVRQAALQDGRQA 484

Query: 241 --VAQIIELAKARQGVMIFAATVRHAEEIYRLLPTEHAALVIGDTPTPERDRIIQAFKQQ 298
             V  +IE ++    V+   A    AEE+ +LLP     LV G     E+  I+ AFK  
Sbjct: 485 YWVCTLIEESE----VLECQAAEDTAEELKQLLPELAIGLVHGRMKPAEKQAIMDAFKAG 540

Query: 299 QIKFLVNVSVLTTGFDAPHVDLIAILRPTESVSLYQ--QIVGRGLRLAAGKSDCLVL 353
            I+ LV  +V+  G D P+  L+ I  P E + L Q  Q+ GR  R  A  S C++L
Sbjct: 541 SIQLLVATTVIEVGVDVPNASLMIIENP-ERLGLAQLHQLRGRVGR-GAVASHCVLL 595