Pairwise Alignments

Query, 594 a.a., ATP-dependent helicase from Vibrio cholerae E7946 ATCC 55056

Subject, 874 a.a., ATP-dependent helicase from Methanococcus maripaludis JJ

 Score = 51.6 bits (122), Expect = 1e-10
 Identities = 78/376 (20%), Positives = 142/376 (37%), Gaps = 91/376 (24%)

Query: 16  VHYFRQHSTPAVIVLPTGAGKSL-----VIAELARLARGR-------VLVLAHVKELVEQ 63
           +H+ R      +I  PTG+GK+L     +I EL R+ +          L ++ +K L   
Sbjct: 45  IHFGRN----TLICSPTGSGKTLSSFIAIINELFRIEKEEGLQNSIYCLYISPLKSLAND 100

Query: 64  NHA-------------KYEGYGLTG---AIFSAGLGRKETDQQV--------VFASVQSV 99
            H              K EG  +TG   AI        E  + +              ++
Sbjct: 101 IHVNLDEPLTEIKEILKEEGNEITGIRHAIRHGDTSNYEKSKMLKKTPHILNTTPETLAI 160

Query: 100 VRNLSEFQNQFSLL---VIDECHRVPDDKNSSYQKV-ITHLLEL-NPGMKVLGLTAT--P 152
           + N  +F+ +   +   +IDE H + D+K   +  + +  L E+ N     +G +AT  P
Sbjct: 161 ILNSPKFKEKLKTVQWVIIDEIHALADNKRGVHLSISLERLREITNQEFLRIGCSATVEP 220

Query: 153 YRLGMGWIYQYHTRGLVRSEEPRFFRDCIFELPIHYLLDEGFLTPAQLIDTP-VMSYDFS 211
             +   ++  Y+                          D+G+  P +++DT  V SYD  
Sbjct: 221 LEMVADYLGGYY--------------------------DDGYKRPVEIVDTRFVRSYDLK 254

Query: 212 QLKPANTGRYRESELDLVIEQSQRATPQIVAQIIELAKARQGVMIFAATVRHAEEIYRLL 271
            L P +         DL+ +  +  + ++  ++  L +  +  +IF  T   AE +   L
Sbjct: 255 LLCPVD---------DLINKTPKEISEKLYEKLDRLIQTHENTLIFTNTRGGAERVLYNL 305

Query: 272 PTEH--------AALVIGDTPTPERDRIIQAFKQQQIKFLVNVSVLTTGFDAPHVDLIAI 323
              +        +    G     +R  + +  K   +KF    S L  G D P++DL+  
Sbjct: 306 RKRYPEKYDETNSGCHHGSLSKEKRLELEEKLKSGNLKFATTSSSLELGIDMPYIDLVVQ 365

Query: 324 LRPTESVSLYQQIVGR 339
           +   +SV    Q +GR
Sbjct: 366 IGSPKSVKTMLQRIGR 381