Pairwise Alignments

Query, 594 a.a., ATP-dependent helicase from Vibrio cholerae E7946 ATCC 55056

Subject, 686 a.a., excinuclease ABC subunit B from Marinobacter adhaerens HP15

 Score = 50.8 bits (120), Expect = 2e-10
 Identities = 51/190 (26%), Positives = 82/190 (43%), Gaps = 31/190 (16%)

Query: 189 LLDEGFLTPAQLIDTPVMSYDFSQLKP------ANTGRYRESELDLVIEQSQRAT----P 238
           L++ GF  P+ L + P+   ++ ++ P      A    Y       V+EQ  R T    P
Sbjct: 371 LVEYGFRLPSALDNRPMKFEEWERIAPQMIFVSATPSTYEAEHAGQVVEQVVRPTGLLDP 430

Query: 239 QI------------VAQIIELAKARQGVMIFAATVRHAEEIYRLLPTEHAALVI---GDT 283
           +I            +++I    K ++ V++   T R AE++   L  EH   V     D 
Sbjct: 431 EIEVRPASTQVDDLLSEIHTRVKVKERVLVTTLTKRMAEDLTDFL-MEHDIKVRYLHSDI 489

Query: 284 PTPERDRIIQAFKQQQIKFLVNVSVLTTGFDAPHVDLIAILRPTESVSLYQ-----QIVG 338
            T ER  II+  ++ +   LV +++L  G D P V L+AIL   +   L       Q +G
Sbjct: 490 DTVERVEIIRDLRRGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTMG 549

Query: 339 RGLRLAAGKS 348
           R  R   GK+
Sbjct: 550 RAARNVHGKA 559



 Score = 28.1 bits (61), Expect = 0.001
 Identities = 11/40 (27%), Positives = 24/40 (60%)

Query: 32 TGAGKSLVIAELARLARGRVLVLAHVKELVEQNHAKYEGY 71
          TG+GK+  IA + +  +   +++AH K L  Q + +++ +
Sbjct: 51 TGSGKTFTIANVIQQVQRPTIIMAHNKTLAAQLYGEFKEF 90