Pairwise Alignments

Query, 594 a.a., ATP-dependent helicase from Vibrio cholerae E7946 ATCC 55056

Subject, 673 a.a., excinuclease ABC subunit B from Pantoea sp. MT58

 Score = 53.9 bits (128), Expect = 2e-11
 Identities = 53/191 (27%), Positives = 82/191 (42%), Gaps = 32/191 (16%)

Query: 189 LLDEGFLTPAQLIDTPVMSYDFSQLKP------ANTGRYR-ESELDLVIEQSQRAT---- 237
           L++ GF  P+ L + P+   +F  L P      A  G+Y  E   D V++Q  R T    
Sbjct: 361 LVEYGFRLPSALDNRPMKFEEFEALAPQTIYVSATPGKYELEKSGDEVVDQVVRPTGLLD 420

Query: 238 ------------PQIVAQIIELAKARQGVMIFAATVRHAEEIYRLLPTEHAALVI---GD 282
                         ++++I +     + V++   T R AE++   L TEH   V     D
Sbjct: 421 PIIEVRPVGTQVDDLLSEIRQRVAINERVLVTVLTKRMAEDLTEYL-TEHGEKVRYLHSD 479

Query: 283 TPTPERDRIIQAFKQQQIKFLVNVSVLTTGFDAPHVDLIAILRPTESVSLYQ-----QIV 337
             T ER  II+  +  +   LV +++L  G D P V L+AIL   +   L       Q +
Sbjct: 480 IDTVERMEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTI 539

Query: 338 GRGLRLAAGKS 348
           GR  R   GK+
Sbjct: 540 GRAARNINGKA 550