Pairwise Alignments

Query, 594 a.a., ATP-dependent helicase from Vibrio cholerae E7946 ATCC 55056

Subject, 1167 a.a., type I restriction enzyme EcoKI subunit R (RefSeq) from Shewanella sp. ANA-3

 Score = 69.7 bits (169), Expect = 6e-16
 Identities = 95/397 (23%), Positives = 167/397 (42%), Gaps = 71/397 (17%)

Query: 4   LRPYQADSVKAVVHYFRQHSTPAVIVLPTGAGKS-LVIAELARLARG----RVLVLAHVK 58
           LR YQ  +++AV     Q+   A++ + TG GK+  +I  + R  +     RVL L    
Sbjct: 445 LRDYQIKAIEAVESVLSQNVRSALLAMATGTGKTRTIIGLIYRFLKAERFKRVLFLVDRF 504

Query: 59  ELVEQNHAKY------EGYGLTGAIFSAGLG--RKETDQQVVFASVQSVVRNLSEFQN-- 108
            L +Q    +      +   L+G    A LG    E + ++  ++VQ++V+ +    N  
Sbjct: 505 ALGDQAQNDFKEVSLEQNLSLSGIYNIAELGDMAAEAETRIQVSTVQAMVKRVFMSDNPP 564

Query: 109 ---QFSLLVIDECHR------------VPDDKNSSYQKVITHLLELNPGMKVLGLTATPY 153
              QF  +++DE HR            +     + Y      +L+    +K+  LTATP 
Sbjct: 565 PLDQFDCIIVDEAHRGYTLDQEMTEGEIATRDAAQYLSSYRRVLDYFDAVKI-ALTATPA 623

Query: 154 R-----LGMGWIYQYHTRGLVRSEEPRFFRDCIFELPIHY--LLDEGFLTPAQLIDTPVM 206
           +      G   +Y Y  R  V  +   +  D   E PI Y  LL +  ++  +      +
Sbjct: 624 KHTSEIFGKP-VYTYSYREAVAED---WLID--HEPPIRYETLLTQNGISFTKGETVSAI 677

Query: 207 SYDFSQLKPANTGRYRESELDLVIEQSQRAT----------PQIVAQIIELAKARQGVMI 256
           +    +++ A      E EL+  +E   R             Q+V ++      +   +I
Sbjct: 678 NTQTGEIESAEL----EDELNFEVEAFNRCVINENFNKVICEQLVQELDPFGDEK--TLI 731

Query: 257 FAATVRHAEEIYRLLPTEHAALVIGDTP-------TPERDRIIQAFKQQQIKFLVNVSV- 308
           F AT  HA+ + RLL     A+  G+         T + D++ Q  KQ + +   N+++ 
Sbjct: 732 FCATDLHADMVKRLLDDAFKAIYNGEYNQAAVAKITGQSDKVNQLIKQYKNERYPNIAIT 791

Query: 309 ---LTTGFDAPHVDLIAILRPTESVSLYQQIVGRGLR 342
              LTTG D P +  +  +R  +S  LY+Q++GR  R
Sbjct: 792 VDLLTTGIDVPKICNLVFMRRVKSRILYEQMIGRATR 828