Pairwise Alignments

Query, 594 a.a., ATP-dependent helicase from Vibrio cholerae E7946 ATCC 55056

Subject, 673 a.a., excinuclease ABC subunit B (RefSeq) from Shewanella sp. ANA-3

 Score = 46.2 bits (108), Expect = 4e-09
 Identities = 48/190 (25%), Positives = 78/190 (41%), Gaps = 32/190 (16%)

Query: 189 LLDEGFLTPAQLIDTPVMSYDFSQLKPAN---TGRYRESELDL----VIEQSQRAT---- 237
           L++ GF  P+ L + P+   +F QL P     +      ELD     ++EQ  R T    
Sbjct: 362 LVEYGFRLPSALDNRPLKFEEFEQLMPQTIYVSATPNPYELDKSGGEIVEQVVRPTGLLD 421

Query: 238 ------------PQIVAQIIELAKARQGVMIFAATVRHAEEIYRLLPTEHAALVI---GD 282
                         +++++ +     + V++   T R +E++   L  EH   V     D
Sbjct: 422 PELEVRPVSIQVDDLLSEVAKRVAVNERVLVTTLTKRMSEDLTEYLD-EHGVKVRYLHSD 480

Query: 283 TPTPERDRIIQAFKQQQIKFLVNVSVLTTGFDAPHVDLIAILRPTESVSLYQ-----QIV 337
             T ER  II+  +  +   LV +++L  G D P V L+ IL   +   L       Q +
Sbjct: 481 IDTVERVEIIRDLRLGKFDVLVGINLLREGLDMPEVSLVCILDADKEGFLRSERSLIQTI 540

Query: 338 GRGLRLAAGK 347
           GR  R   GK
Sbjct: 541 GRAARNVNGK 550